RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 OR10AD1Q8NGE0 317 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 GPX8Q8TED1 209 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 AQP3Q92482 292 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 PIGCQ92535 297 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 FAM168AQ92567 244 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 HPS1Q92902 700 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 ERGIC1Q969X5 290 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 OR2V2Q96R30 315 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 S100A13Q99584 98 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 URM1Q9BTM9 101 aaKnown RBP8.53□□□□□ -1.04
UPF1-213ENST00000601981 RTL8AQ9BWD3 113 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 CHODLQ9H9P2 273 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 TAS2R8Q9NYW2 309 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 COPZ2Q9P299 210 aa8.53□□□□□ -1.04
UPF1-213ENST00000601981 ZNF107Q9UII5 783 aaPredicted RBP8.53□□□□□ -1.04
UPF1-213ENST00000601981 AKAP9Q99996 3911 aa8.52□□□□□ -1.04
UPF1-213ENST00000601981 IGKV1-27A0A075B6S5 117 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 A0A1B0GWJ7 208 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 MEIOCA2RUB1 952 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 LRRC30A6NM36 301 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 ZNF850A8MQ14 1090 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 F5H5P2 479 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 MLNRO43193 412 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 NDUFS7O75251 213 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 ZNF780AO75290 641 aaPredicted RBP8.52□□□□□ -1.05
UPF1-213ENST00000601981 CRTAPO75718 401 aaPredicted RBP8.52□□□□□ -1.05
UPF1-213ENST00000601981 RBBP9O75884 186 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 MPIG6BO95866 241 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 HPXP02790 462 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 MELTFP08582 738 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 CSF1P09603 554 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 PTHLHP12272 177 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 IRF2P14316 349 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 SLC25A16P16260 332 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 CD200P41217 278 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 ACTBP60709 375 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 ACTG1P63261 375 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 PRDX4Q13162 271 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 MOGAT2Q3SYC2 334 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 ZNF260Q3ZCT1 412 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 MOB3CQ70IA8 216 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 C1orf87Q8N0U7 546 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 FAM89BQ8N5H3 189 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 ZNF525Q8N782 197 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 ZSCAN4Q8NAM6 433 aaPredicted RBP8.52□□□□□ -1.05
UPF1-213ENST00000601981 TMEM104Q8NE00 496 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 PXT1Q8NFP0 134 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 OR56B1Q8NGI3 324 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 OR5D18Q8NGL1 313 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 OR11L1Q8NGX0 322 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 OR10R2Q8NGX6 335 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 CHAC2Q8WUX2 184 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 ITLN1Q8WWA0 313 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 GTF3AQ92664 365 aaKnown RBP8.52□□□□□ -1.05
UPF1-213ENST00000601981 CREB3L1Q96BA8 519 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 TIMD4Q96H15 378 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 MEGF10Q96KG7 1140 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 TM2D1Q9BX74 207 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 METTL9Q9H1A3 318 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 MMP28Q9H239 520 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 DPAGT1Q9H3H5 408 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 FN3KRPQ9HA64 309 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 IL36GQ9NZH8 169 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 NLKQ9UBE8 527 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 KLK11Q9UBX7 282 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 ING4Q9UNL4 249 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 PPP1R3CQ9UQK1 317 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 ZFHX3Q15911 3703 aa8.52□□□□□ -1.05
UPF1-213ENST00000601981 A0A0A6YYD4 124 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 FAM230AA0A1W2PPH8 454 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 PQLC2LA1A4F0 135 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 OR5B21A6NL26 309 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 TMEM210A6NLX4 147 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 H0YL77 283 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 LILRA1O75019 489 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 GSTP1P09211 210 aaKnown RBP8.51□□□□□ -1.05
UPF1-213ENST00000601981 TMEM225BP0DP42 221 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 MGMTP16455 207 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 FAUP35544 74 aaKnown RBP8.51□□□□□ -1.05
UPF1-213ENST00000601981 GATA4P43694 442 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 VEGFCP49767 419 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 TMEM33P57088 247 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 BTG1P62324 171 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 ARL6IP1Q15041 203 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 CEACAM21Q3KPI0 293 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 SLC22A6Q4U2R8 563 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 RSBN1Q5VWQ0 802 aaPredicted RBP8.51□□□□□ -1.05
UPF1-213ENST00000601981 Q6ZTK2 550 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 C1QL2Q7Z5L3 287 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 ZNF554Q86TJ5 538 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 CCL17Q92583 94 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 SEH1LQ96EE3 360 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 Q96MF0 132 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 GAL3ST1Q99999 423 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 MARVELD1Q9BSK0 173 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 HRASLSQ9HDD0 168 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.51□□□□□ -1.05
UPF1-213ENST00000601981 PCDHB16Q9NRJ7 776 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 NUBP2Q9Y5Y2 271 aa8.51□□□□□ -1.05
UPF1-213ENST00000601981 A0A1W2PP11 408 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms