RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 HAND1O96004 215 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 GABRR1P24046 479 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 CBX1P83916 185 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 SNAPC1Q16533 368 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 PRAMEF5Q5TYX0 476 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 SLX4IPQ5VYV7 408 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 OR52W1Q6IF63 320 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 TRAPPC6BQ86SZ2 158 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 EGFL6Q8IUX8 553 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 ELMOD2Q8IZ81 293 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 ASB17Q8WXJ9 295 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 SEBOXQ9HB31 216 aaPredicted RBP13.27□□□□□ -0.29
USE1-208ENST00000600970 ZFP57Q9NU63 452 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 IL36RNQ9UBH0 155 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 OR52A1Q9UKL2 312 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 TMEM14AQ9Y6G1 99 aa13.27□□□□□ -0.29
USE1-208ENST00000600970 HUWE1Q7Z6Z7 4374 aaKnown RBP13.27□□□□□ -0.29
USE1-208ENST00000600970 FAM172BPA6NC97 362 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 ARRDC5A6NEK1 342 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 CCDC182A6NF36 153 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 DHRS7CA6NNS2 312 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 NUDT19A8MXV4 375 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 MGST3O14880 152 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 E2F6O75461 281 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 SLC6A1P30531 599 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 OR3A4PP47883 348 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 ZNF91Q05481 1191 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 KLHL22Q53GT1 634 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 C16orf89Q6UX73 402 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 KLHL30-AS1Q8NEE0 82 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 EMG1Q92979 244 aaKnown RBP13.26□□□□□ -0.29
USE1-208ENST00000600970 NOL4LQ96MY1 436 aaPredicted RBP13.26□□□□□ -0.29
USE1-208ENST00000600970 ASCL2Q99929 193 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 APOL4Q9BPW4 351 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 MOB1AQ9H8S9 216 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 SLC7A11Q9UPY5 501 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 MOB4Q9Y3A3 225 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 HSPE1-MOB4S4R3N1 261 aa13.26□□□□□ -0.29
USE1-208ENST00000600970 BUB1B-PAK6H3BSN5 160 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 MAGEB4O15481 346 aaPredicted RBP13.25□□□□□ -0.29
USE1-208ENST00000600970 OSMP13725 252 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 CDK2P24941 298 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 ERP29P30040 261 aaKnown RBP13.25□□□□□ -0.29
USE1-208ENST00000600970 GDNFP39905 211 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 CEACAM3P40198 252 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 GK3PQ14409 553 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 UBE2V2Q15819 145 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 FAM98BQ52LJ0 330 aaKnown RBP13.25□□□□□ -0.29
USE1-208ENST00000600970 CASC10Q5T4H9 136 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 TPTE2P1Q5T6R2 138 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 BCL2L15Q5TBC7 163 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 TMEM236Q5W0B7 351 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 HEPN1Q6WQI6 88 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 PLEKHG7Q6ZR37 379 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 SLC25A26Q70HW3 274 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 TMEM179BQ7Z7N9 219 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 CHPT1Q8WUD6 406 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 DUX3Q96PT4 197 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 PRR25Q96S07 402 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 ZNF286AQ9HBT8 521 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 ARL8BQ9NVJ2 186 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 TAGLN3Q9UI15 199 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 R4GMQ9 66 aa13.25□□□□□ -0.29
USE1-208ENST00000600970 BIRC6Q9NR09 4857 aa13.24□□□□□ -0.29
USE1-208ENST00000600970 LY6LH3BQJ8 138 aa13.24□□□□□ -0.29
USE1-208ENST00000600970 SNRNP70P08621 437 aaKnown RBP13.24□□□□□ -0.29
USE1-208ENST00000600970 DUSP1P28562 367 aa13.24□□□□□ -0.29
USE1-208ENST00000600970 CD34P28906 385 aa13.24□□□□□ -0.29
USE1-208ENST00000600970 OR3A1P47881 315 aa13.24□□□□□ -0.29
USE1-208ENST00000600970 P2RX3P56373 397 aa13.24□□□□□ -0.29
USE1-208ENST00000600970 HLA-DRB5Q30154 266 aa13.24□□□□□ -0.29
USE1-208ENST00000600970 ENTHD1Q8IYW4 607 aa13.24□□□□□ -0.29
USE1-208ENST00000600970 CREB3L1Q96BA8 519 aa13.24□□□□□ -0.29
USE1-208ENST00000600970 GAL3ST2Q9H3Q3 398 aa13.24□□□□□ -0.29
USE1-208ENST00000600970 TRGV10A0A0A0MS01 117 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 CST1P01037 141 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 FAM106CPP0CH98 169 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 CCL1P22362 96 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 MNDAP41218 407 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 NPBWR2P48146 333 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 LUMP51884 338 aaPredicted RBP13.23□□□□□ -0.29
USE1-208ENST00000600970 FUT6P51993 359 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 CXCR4P61073 352 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 ZNF146Q15072 292 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 CCDC144NLQ6NUI1 221 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 ZNF322Q6U7Q0 402 aaPredicted RBP13.23□□□□□ -0.29
USE1-208ENST00000600970 DHFR2Q86XF0 187 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 MUC7Q8TAX7 377 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 CORO2AQ92828 525 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 RAX2Q96IS3 184 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 SLC25A19Q9HC21 320 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 RBFOX1Q9NWB1 397 aaKnown RBP13.23□□□□□ -0.29
USE1-208ENST00000600970 NDE1Q9NXR1 346 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 TAS2R3Q9NYW6 316 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 LINC00527Q9UJ94 153 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 SNX5Q9Y5X3 404 aa13.23□□□□□ -0.29
USE1-208ENST00000600970 FAM90A18PA6NE21 464 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 FAM90A16PA6NEW6 464 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 FAM90A20PA6NIJ5 464 aa13.22□□□□□ -0.29
USE1-208ENST00000600970 FAM90A9PA6NNJ1 464 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms