RNA–Protein interactions for RNA: ENST00000600026.5

LTBP4-227, Transcript of latent transforming growth factor beta binding protein 4, human

TSL 3

Gene LTBP4, Length 723 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LTBP4-227	ENST00000600026	PAH	P00439	452 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	PPIAL4F	P0DN26	164 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	MGMT	P16455	207 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	FGF12	P61328	243 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	QRFP	P83859	136 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	FAM189A2	Q15884	450 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	OR10K2	Q6IF99	312 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	ACP7	Q6ZNF0	438 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	FAM90A1	Q86YD7	464 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	C19orf18	Q8NEA5	215 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026		Q8NFD4	153 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	CLDND2	Q8NHS1	167 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	FAM46B	Q96A09	425 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	PTX4	Q96A99	478 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	URM1	Q9BTM9	101 aa	Known RBP	18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	TMEM59	Q9BXS4	323 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	KCNK15	Q9H427	330 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	BANF2	Q9H503	90 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	HES4	Q9HCC6	221 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	HMG20A	Q9NP66	347 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026	PPIAL4A	Q9Y536	164 aa		18.38	■□□□□ 0.53
LTBP4-227	ENST00000600026		F8VVB4	439 aa		18.37	■□□□□ 0.53
LTBP4-227	ENST00000600026		F8VWA3	439 aa		18.37	■□□□□ 0.53
LTBP4-227	ENST00000600026	RAB6A	P20340	208 aa		18.37	■□□□□ 0.53
LTBP4-227	ENST00000600026	TMEM104	Q8NE00	496 aa		18.37	■□□□□ 0.53
LTBP4-227	ENST00000600026	SELENOI	Q9C0D9	397 aa		18.37	■□□□□ 0.53
LTBP4-227	ENST00000600026	C6orf62	Q9GZU0	229 aa	Predicted RBP	18.37	■□□□□ 0.53
LTBP4-227	ENST00000600026	WDR13	Q9H1Z4	485 aa		18.37	■□□□□ 0.53
LTBP4-227	ENST00000600026	GLS2	Q9UI32	602 aa		18.37	■□□□□ 0.53
LTBP4-227	ENST00000600026	A3GALT2	U3KPV4	340 aa		18.37	■□□□□ 0.53
LTBP4-227	ENST00000600026		A0A1W2PP11	408 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	LGALS8	O00214	317 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	LDLRAD4	O15165	306 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	CD99	P14209	185 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	MDH2	P40926	338 aa	Known RBP	18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	UNC119	Q13432	240 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	MICB	Q29980	383 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	KRTAP21-3	Q3LHN1	58 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	TMEM155	Q4W5P6	130 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	SAMD12	Q8N8I0	201 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	OR51T1	Q8NGJ9	327 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	OR5H6	Q8NGV6	325 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	C18orf12	Q96KH6	178 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	GAL3ST1	Q99999	423 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	NXF2	Q9GZY0	626 aa	Known RBP	18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	MMP27	Q9H306	513 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	NLK	Q9UBE8	527 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	ST3GAL6	Q9Y274	331 aa		18.36	■□□□□ 0.53
LTBP4-227	ENST00000600026	TRAV38-1	A0A0B4J264	116 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	METTL21EP	A6NDL7	271 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	OOEP	A6NGQ2	149 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	C3orf80	F5H4A9	247 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	FSTL3	O95633	263 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	KNG1	P01042	644 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	MUC1	P15941	1255 aa	Predicted RBP	18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	IL2RG	P31785	369 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	SNU13	P55769	128 aa	Known RBP	18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	RBM11	P57052	281 aa	Known RBP	18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	RPS27A	P62979	156 aa	Known RBP	18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	IL13RA2	Q14627	380 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	KCNJ8	Q15842	424 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	NHLRC3	Q5JS37	347 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	SPIN3	Q5JUX0	258 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	UBE2NL	Q5JXB2	153 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	TEX36	Q5VZQ5	186 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	SFRP4	Q6FHJ7	346 aa	Predicted RBP	18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	LRRC28	Q86X40	367 aa	Predicted RBP	18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	MUC20	Q8N307	709 aa	Predicted RBP	18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	POM121	Q96HA1	1249 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	CMTM3	Q96MX0	182 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	TMEM165	Q9HC07	324 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	PTTG2	Q9NZH5	202 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	ADAM30	Q9UKF2	790 aa		18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	FLNA	P21333	2647 aa	Known RBP	18.35	■□□□□ 0.53
LTBP4-227	ENST00000600026	RGS5	O15539	181 aa		18.34	■□□□□ 0.53
LTBP4-227	ENST00000600026	CPT2	P23786	658 aa		18.34	■□□□□ 0.53
LTBP4-227	ENST00000600026	LINC00596	Q86U02	117 aa		18.34	■□□□□ 0.53
LTBP4-227	ENST00000600026	SPIC	Q8N5J4	248 aa		18.34	■□□□□ 0.53
LTBP4-227	ENST00000600026	DEFB108B	Q8NET1	73 aa		18.34	■□□□□ 0.53
LTBP4-227	ENST00000600026		Q96M66	194 aa		18.34	■□□□□ 0.53
LTBP4-227	ENST00000600026	RHBDL2	Q9NX52	303 aa		18.34	■□□□□ 0.53
LTBP4-227	ENST00000600026	MAP1A	P78559	2803 aa	Predicted RBP	18.33	■□□□□ 0.53
LTBP4-227	ENST00000600026	IGHV3OR15-7	A0A075B7D8	119 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM90A10P	A6NDY2	464 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM90A18P	A6NE21	464 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM90A16P	A6NEW6	464 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM90A20P	A6NIJ5	464 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM90A8P	A6NJQ4	464 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM90A7P	A6NKC0	464 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM90A22P	A8MWA6	464 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM90A12P	A8MX19	464 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM90A5P	A8MXJ8	464 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM90A23P	A8MXZ1	464 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026		H3BUI4	141 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	SH2D1B	O14796	132 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	INHBB	P09529	407 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM90A15P	P0C7V4	464 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM90A13P	P0C7W8	464 aa		18.33	■□□□□ 0.52
LTBP4-227	ENST00000600026	FAM90A14P	P0C7W9	464 aa		18.33	■□□□□ 0.52

Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms