RNA–Protein interactions for RNA: ENST00000593425.5

LIG1-205, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-205ENST00000593425 CATSPERDQ86XM0 798 aa13.08□□□□□ -0.32
LIG1-205ENST00000593425 EGFL6Q8IUX8 553 aa13.08□□□□□ -0.32
LIG1-205ENST00000593425 YIPF7Q8N8F6 280 aa13.08□□□□□ -0.32
LIG1-205ENST00000593425 TBX5Q99593 518 aa13.08□□□□□ -0.32
LIG1-205ENST00000593425 CHST5Q9GZS9 411 aa13.08□□□□□ -0.32
LIG1-205ENST00000593425 RBFOX1Q9NWB1 397 aaKnown RBP13.08□□□□□ -0.32
LIG1-205ENST00000593425 TCRBV3S1A0A5B6 114 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 SYT7O43581 403 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 HOXB6P17509 224 aaKnown RBP13.07□□□□□ -0.32
LIG1-205ENST00000593425 GABRR1P24046 479 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 HTR1DP28221 377 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 PEX2P28328 305 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 DUSP1P28562 367 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 NPBWR2P48146 333 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 FUT6P51993 359 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 FLOT2Q14254 428 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 VAX1Q5SQQ9 334 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 SLX4IPQ5VYV7 408 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 C11orf87Q6NUJ2 197 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 C10orf99Q6UWK7 81 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 TMEM163Q8TC26 289 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 NRBF2Q96F24 287 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 BORCS8Q96FH0 119 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 IL4I1Q96RQ9 567 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 PRRG3Q9BZD7 231 aa13.07□□□□□ -0.32
LIG1-205ENST00000593425 H2AFY2Q9P0M6 372 aaPredicted RBP13.07□□□□□ -0.32
LIG1-205ENST00000593425 SH2D7A6NKC9 451 aaPredicted RBP13.06□□□□□ -0.32
LIG1-205ENST00000593425 GATBO75879 557 aaKnown RBP13.06□□□□□ -0.32
LIG1-205ENST00000593425 PF4P02776 101 aa13.06□□□□□ -0.32
LIG1-205ENST00000593425 KRT8P05787 483 aa13.06□□□□□ -0.32
LIG1-205ENST00000593425 CALCBP10092 127 aa13.06□□□□□ -0.32
LIG1-205ENST00000593425 BCL3P20749 454 aa13.06□□□□□ -0.32
LIG1-205ENST00000593425 SNU13P55769 128 aaKnown RBP13.06□□□□□ -0.32
LIG1-205ENST00000593425 KRTAP10-11P60412 298 aa13.06□□□□□ -0.32
LIG1-205ENST00000593425 C12orf73Q69YU5 71 aa13.06□□□□□ -0.32
LIG1-205ENST00000593425 CENPVQ7Z7K6 275 aaPredicted RBP13.06□□□□□ -0.32
LIG1-205ENST00000593425 CCDC197Q8NCU1 140 aa13.06□□□□□ -0.32
LIG1-205ENST00000593425 MYDGFQ969H8 173 aa13.06□□□□□ -0.32
LIG1-205ENST00000593425 SEBOXQ9HB31 216 aaPredicted RBP13.06□□□□□ -0.32
LIG1-205ENST00000593425 WI2-2373I1.2A0A1W2PRP0 233 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 TCRBV4S1A1TA0A5B7 111 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 FAM172BPA6NC97 362 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 ZAR1LA6NP61 321 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 ENTPD6O75354 484 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 APOL3O95236 402 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 LPLP06858 475 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 GDNFP39905 211 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 OR3A1P47881 315 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 SLC35A2P78381 396 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 IL18R1Q13478 541 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 ABCA11PQ4W5N1 156 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 PRAMEF5Q5TYX0 476 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 ZBTB49Q6ZSB9 765 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 C16orf82Q7Z2V1 217 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 TRAPPC6BQ86SZ2 158 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 PRSS35Q8N3Z0 413 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 UTP4Q969X6 686 aaKnown RBP13.05□□□□□ -0.32
LIG1-205ENST00000593425 SLC25A33Q9BSK2 321 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 LIN7BQ9HAP6 207 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 INPP5EQ9NRR6 644 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 KRT84Q9NSB2 600 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 TSSC4Q9Y5U2 329 aaPredicted RBP13.05□□□□□ -0.32
LIG1-205ENST00000593425 DNAH9Q9NYC9 4486 aa13.05□□□□□ -0.32
LIG1-205ENST00000593425 RYR3Q15413 4870 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 IGKV1-9A0A0C4DH69 117 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 TRBV2A0A0J9YWF9 115 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 LOC107986453A0A1B0GWG9 222 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 A0A1W2PQL4 384 aaPredicted RBP13.04□□□□□ -0.32
LIG1-205ENST00000593425 SIRPB1O00241 398 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 MGST3O14880 152 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 AMY1AP04745 511 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 AMY2AP04746 511 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 PRKACAP17612 351 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 POU3F4P49335 361 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 P2RX3P56373 397 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 ZNF146Q15072 292 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 GID4Q8IVV7 300 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 Q8IYB0 196 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 ENTHD1Q8IYW4 607 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 FAM58AQ8N1B3 248 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 ABHD12Q8N2K0 398 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 BCAS4Q8TDM0 211 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 RCC1LQ96I51 464 aaKnown RBP13.04□□□□□ -0.32
LIG1-205ENST00000593425 DPM3Q9P2X0 92 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 POMPQ9Y244 141 aa13.04□□□□□ -0.32
LIG1-205ENST00000593425 UBE2J1Q9Y385 318 aaPredicted RBP13.04□□□□□ -0.32
LIG1-205ENST00000593425 METTL15A6NJ78 407 aa13.03□□□□□ -0.32
LIG1-205ENST00000593425 IGLV1-47P01700 117 aa13.03□□□□□ -0.32
LIG1-205ENST00000593425 CDK2P24941 298 aa13.03□□□□□ -0.32
LIG1-205ENST00000593425 ERP29P30040 261 aaKnown RBP13.03□□□□□ -0.32
LIG1-205ENST00000593425 KIR3DL2P43630 455 aa13.03□□□□□ -0.32
LIG1-205ENST00000593425 RBP2P50120 134 aa13.03□□□□□ -0.32
LIG1-205ENST00000593425 BDH1Q02338 343 aa13.03□□□□□ -0.32
LIG1-205ENST00000593425 KHDC1LQ5JSQ8 128 aa13.03□□□□□ -0.32
LIG1-205ENST00000593425 RDH10Q8IZV5 341 aa13.03□□□□□ -0.32
LIG1-205ENST00000593425 OR4X2Q8NGF9 303 aa13.03□□□□□ -0.32
LIG1-205ENST00000593425 ADAT3Q96EY9 351 aaPredicted RBP13.03□□□□□ -0.32
LIG1-205ENST00000593425 AKR1E2Q96JD6 320 aa13.03□□□□□ -0.32
LIG1-205ENST00000593425 ADI1Q9BV57 179 aa13.03□□□□□ -0.32
LIG1-205ENST00000593425 ZNF286AQ9HBT8 521 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms