RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 PLEKHA6Q9Y2H5 1048 aa11.4□□□□□ -0.58
VMP1-217ENST00000593168 ABCA4P78363 2273 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 H7C417 338 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 CDIPTO14735 213 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 TPD52L2O43399 206 aaKnown RBP11.39□□□□□ -0.59
VMP1-217ENST00000593168 RHBDL1O75783 438 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 CD3GP09693 182 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 PGA5P0DJD9 388 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 HIST1H1DP16402 221 aaKnown RBP11.39□□□□□ -0.59
VMP1-217ENST00000593168 BLVRBP30043 206 aaPredicted RBP11.39□□□□□ -0.59
VMP1-217ENST00000593168 INPP1P49441 399 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 SRP9P49458 86 aaKnown RBP11.39□□□□□ -0.59
VMP1-217ENST00000593168 ZNF81P51508 661 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 ERVK11-1P61568 191 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 SSBP1Q04837 148 aaKnown RBP11.39□□□□□ -0.59
VMP1-217ENST00000593168 TAF9Q16594 264 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 CDNFQ49AH0 187 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 SEH1LQ96EE3 360 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 PIK3IP1Q96FE7 263 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 ELMOD3Q96FG2 381 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 DHRS9Q9BPW9 319 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 CISD1Q9NZ45 108 aaKnown RBP11.39□□□□□ -0.59
VMP1-217ENST00000593168 MTFP1Q9UDX5 166 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 HSF4Q9ULV5 492 aa11.39□□□□□ -0.59
VMP1-217ENST00000593168 MEIOCA2RUB1 952 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 B9A039 149 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 F8VVB4 439 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 F8VWA3 439 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 MFNGO00587 321 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 SPRY3O43610 288 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 LANCL1O43813 399 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 ORC5O43913 435 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 CA11O75493 328 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 RBBP9O75884 186 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 PLAUP00749 431 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 IGHV1-46P01743 117 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 PTHLHP12272 177 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 FOSL1P15407 271 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 GNB3P16520 340 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 TNFSF4P23510 183 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 GABRR1P24046 479 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 DNASE1P24855 282 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 CFHR2P36980 270 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 GATA4P43694 442 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 RBM11P57052 281 aaKnown RBP11.38□□□□□ -0.59
VMP1-217ENST00000593168 ASAH1Q13510 395 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 IL13RA2Q14627 380 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 MPV17LQ2QL34 196 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 PLAC9Q5JTB6 97 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 SIGIRRQ6IA17 410 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 Q71RC1 249 aaPredicted RBP11.38□□□□□ -0.59
VMP1-217ENST00000593168 LINC00596Q86U02 117 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 FAM58AQ8N1B3 248 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 POC5Q8NA72 575 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 MINDY2Q8NBR6 621 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 POC1AQ8NBT0 407 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 OR10Z1Q8NGY1 313 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 LILRB1Q8NHL6 650 aaPredicted RBP11.38□□□□□ -0.59
VMP1-217ENST00000593168 GTF3AQ92664 365 aaKnown RBP11.38□□□□□ -0.59
VMP1-217ENST00000593168 NEUROG1Q92886 237 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 GCDHQ92947 438 aaPredicted RBP11.38□□□□□ -0.59
VMP1-217ENST00000593168 ARHGAP5-AS1Q96IT6 56 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 MEGF10Q96KG7 1140 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 HS3ST6Q96QI5 342 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 SMR3AQ99954 134 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 NRIP2Q9BQI9 281 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 CLEC4MQ9H2X3 399 aaPredicted RBP11.38□□□□□ -0.59
VMP1-217ENST00000593168 RBFOX1Q9NWB1 397 aaKnown RBP11.38□□□□□ -0.59
VMP1-217ENST00000593168 TAS2R8Q9NYW2 309 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 IL19Q9UHD0 177 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 TBC1D24Q9ULP9 559 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 KCNK7Q9Y2U2 307 aa11.38□□□□□ -0.59
VMP1-217ENST00000593168 TMEM235A6NFC5 223 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 A6NLC8 198 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 C17orf100A8MU93 164 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 SERPINE3A8MV23 424 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 VGLL3A8MV65 326 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 M0R233 179 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 GEMIN2O14893 280 aaKnown RBP11.37□□□□□ -0.59
VMP1-217ENST00000593168 PLA2G10O15496 165 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 ECDO95905 644 aaPredicted RBP11.37□□□□□ -0.59
VMP1-217ENST00000593168 LPLP06858 475 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 CD55P08174 381 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 GSTT2BP0CG30 244 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 CHATP28329 748 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 GDNFP39905 211 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 PMELP40967 661 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 DAZAP2Q15038 168 aaPredicted RBP11.37□□□□□ -0.59
VMP1-217ENST00000593168 OXA1LQ15070 435 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 MPPED2Q15777 294 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 PIGYQ3MUY2 71 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 ZNF672Q499Z4 452 aaPredicted RBP11.37□□□□□ -0.59
VMP1-217ENST00000593168 RNASE12Q5GAN4 147 aaKnown RBP11.37□□□□□ -0.59
VMP1-217ENST00000593168 PRAMEF6Q5VXH4 476 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 ZNF57Q68EA5 555 aaPredicted RBP11.37□□□□□ -0.59
VMP1-217ENST00000593168 WDR82Q6UXN9 313 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 TOMM5Q8N4H5 51 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 CHPT1Q8WUD6 406 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 DEDD2Q8WXF8 326 aa11.37□□□□□ -0.59
VMP1-217ENST00000593168 ST8SIA4Q92187 359 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms