RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 CDK5Q00535 292 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 SLC34A1Q06495 639 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 GAGE2BQ13066 116 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 EIF2B1Q14232 305 aaKnown RBP6.18□□□□□ -1.42
VMP1-213ENST00000591877 GK3PQ14409 553 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 GINS1Q14691 196 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 GAGE2EQ4V326 116 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 ARMCX4Q5H9R4 360 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 WDR25Q64LD2 544 aaPredicted RBP6.18□□□□□ -1.42
VMP1-213ENST00000591877 GAGE2AQ6NT46 116 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 C12orf54Q6X4T0 127 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 SLC16A9Q7RTY1 509 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 ERI1Q8IV48 349 aaKnown RBP6.18□□□□□ -1.42
VMP1-213ENST00000591877 C1orf87Q8N0U7 546 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 BPIFB2Q8N4F0 458 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 GCSAMQ8N6F7 178 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 PAPD5Q8NDF8 572 aaKnown RBP6.18□□□□□ -1.42
VMP1-213ENST00000591877 OR56B2PQ8NGI1 322 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 OR6N2Q8NGY6 317 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 TEX47Q8TBZ9 253 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 INTS14Q96SY0 518 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 ADAT1Q9BUB4 502 aaKnown RBP6.18□□□□□ -1.42
VMP1-213ENST00000591877 SLC22A4Q9H015 551 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 OR51V1Q9H2C8 321 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 NTN4Q9HB63 628 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 S100A14Q9HCY8 104 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 PDP1Q9P0J1 537 aaPredicted RBP6.18□□□□□ -1.42
VMP1-213ENST00000591877 GAGE2DQ9UEU5 116 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 OR5V1Q9UGF6 321 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 KLHDC2Q9Y2U9 406 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 N6AMT1Q9Y5N5 214 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 POMT1Q9Y6A1 747 aa6.18□□□□□ -1.42
VMP1-213ENST00000591877 IGHV3OR16-10A0A075B7F0 116 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 hCG_38984A0A1B0GV85 526 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 LGALS8O00214 317 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 XRCC2O43543 280 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 SELENOFO60613 162 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 PPIAL4GP0DN37 164 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 OPRL1P41146 370 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 BMXP51813 675 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 P2RX3P56373 397 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 ZNF121P58317 390 aaPredicted RBP6.17□□□□□ -1.42
VMP1-213ENST00000591877 GRB2P62993 217 aaKnown RBP6.17□□□□□ -1.42
VMP1-213ENST00000591877 ACTG1P63261 375 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 TAF13Q15543 124 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 TMEM236Q5W0B7 351 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 PLBD1Q6P4A8 553 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 TEX38Q6PEX7 206 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 LRRN1Q6UXK5 716 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 C9orf139Q6ZV77 190 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 PARP8Q8N3A8 854 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 BBS1Q8NFJ9 593 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 OR8B3Q8NGG8 313 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 OR11L1Q8NGX0 322 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 UPRTQ96BW1 309 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 ZMYND19Q96E35 227 aaPredicted RBP6.17□□□□□ -1.42
VMP1-213ENST00000591877 DUS3LQ96G46 650 aaKnown RBP6.17□□□□□ -1.42
VMP1-213ENST00000591877 REEP6Q96HR9 211 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 DUX5Q96PT3 197 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 OR8B2Q96RD0 313 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 FGF23Q9GZV9 251 aaPredicted RBP6.17□□□□□ -1.42
VMP1-213ENST00000591877 FN3KRPQ9HA64 309 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 C1orf123Q9NWV4 160 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 DNAJC27Q9NZQ0 273 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 RNF7Q9UBF6 113 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 CLN8Q9UBY8 286 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 SNX5Q9Y5X3 404 aa6.17□□□□□ -1.42
VMP1-213ENST00000591877 TRAV40A0A0B4J280 105 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 MDFIC2A0A1B0GVS7 189 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 A0A1B0GW55 424 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 DNAJC9-AS1A6NH13 148 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 PRR32B1ATL7 298 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 PRR23D1E9PI22 279 aaPredicted RBP6.16□□□□□ -1.42
VMP1-213ENST00000591877 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.16□□□□□ -1.42
VMP1-213ENST00000591877 GNGT2O14610 69 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 PHYHO14832 338 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 HSPA12AO43301 675 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 DUX4L2P0CJ85 424 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 DUX4L3P0CJ86 424 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 DUX4L4P0CJ87 422 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 DUX4L5P0CJ88 424 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 DUX4L6P0CJ89 424 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 DUX4L7P0CJ90 424 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 PRR23D2P0DMB1 279 aaPredicted RBP6.16□□□□□ -1.42
VMP1-213ENST00000591877 IRF2P14316 349 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 SLC2A5P22732 501 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 PRTN3P24158 256 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 ACKR3P25106 362 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 HSD11B1P28845 292 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 DDOSTP39656 456 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 VHLP40337 213 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 CAPZA1P52907 286 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 HCCSP53701 268 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 CSNK2BP67870 215 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 TEX36Q5VZQ5 186 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 DUX4L9Q6RFH8 374 aaPredicted RBP6.16□□□□□ -1.42
VMP1-213ENST00000591877 BTNL3Q6UXE8 466 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 SPATA24Q86W54 205 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 FGFRL1Q8N441 504 aa6.16□□□□□ -1.42
VMP1-213ENST00000591877 SPERTQ8NA61 448 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms