RNA–Protein interactions for RNA: ENST00000589990.1

PRKCSH-210, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 2

Gene PRKCSH, Length 567 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-210ENST00000589990 ZNF676Q8N7Q3 588 aa10.08□□□□□ -0.8
PRKCSH-210ENST00000589990 ASCC1Q8N9N2 400 aaKnown RBP10.08□□□□□ -0.8
PRKCSH-210ENST00000589990 OTULINQ96BN8 352 aa10.08□□□□□ -0.8
PRKCSH-210ENST00000589990 INTS14Q96SY0 518 aa10.08□□□□□ -0.8
PRKCSH-210ENST00000589990 NRIP2Q9BQI9 281 aa10.08□□□□□ -0.8
PRKCSH-210ENST00000589990 RIBC2Q9H4K1 309 aa10.08□□□□□ -0.8
PRKCSH-210ENST00000589990 DCLRE1BQ9H816 532 aa10.08□□□□□ -0.8
PRKCSH-210ENST00000589990 PALMDQ9NP74 551 aa10.08□□□□□ -0.8
PRKCSH-210ENST00000589990 TMEM82A0PJX8 343 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 NXPH2O95156 264 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 APOC1P02654 83 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 RBP4P02753 201 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 ZNF3P17036 446 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 CHATP28329 748 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 HAAOP46952 286 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 OR3A4PP47883 348 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 ALDH3A2P51648 485 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 CDK5Q00535 292 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 EDDM3AQ14507 147 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 SNAPC1Q16533 368 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 LRRC36Q1X8D7 754 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 ZIK1Q3SY52 487 aaPredicted RBP10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 UTF1Q5T230 341 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 PLCXD3Q63HM9 321 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 KCTD18Q6PI47 426 aaPredicted RBP10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 LCNL1Q6ZST4 164 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 KRT74Q7RTS7 529 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 OVCH2Q7RTZ1 564 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 EGFL6Q8IUX8 553 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 OR5A2Q8NGI9 324 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 FAM81AQ8TBF8 368 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 AKR1E2Q96JD6 320 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 ZNF714Q96N38 554 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 SLC29A1Q99808 456 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 CLEC7AQ9BXN2 247 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 TMEM133Q9H2Q1 129 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 HES4Q9HCC6 221 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 TVP23BQ9NYZ1 205 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 SLC22A13Q9Y226 551 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 SESN1Q9Y6P5 492 aa10.07□□□□□ -0.8
PRKCSH-210ENST00000589990 OR5B21A6NL26 309 aa10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 J3QT63 122 aa10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 RRP9O43818 475 aaKnown RBP10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 SELENOFO60613 162 aa10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 ALPLP05186 524 aa10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 HTR1DP28221 377 aa10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 EPHA2P29317 976 aa10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 GSTT1P30711 240 aa10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 POLR2IP36954 125 aaKnown RBP10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 GDNFP39905 211 aa10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 PSMA6P60900 246 aaKnown RBP10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 LPCAT4Q643R3 524 aa10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 MEPCEQ7L2J0 689 aaKnown RBP10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 CAPSLQ8WWF8 208 aa10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 SLC25A19Q9HC21 320 aa10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 CMC2Q9NRP2 79 aa10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 HHLA2Q9UM44 414 aa10.06□□□□□ -0.8
PRKCSH-210ENST00000589990 A6NIN4 97 aa10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 LINC01548A6NM66 108 aa10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 PRR23D1E9PI22 279 aaPredicted RBP10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 CCL24O00175 119 aa10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 PSMD9O00233 223 aa10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 NOS1APO75052 506 aaPredicted RBP10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 PRR23D2P0DMB1 279 aaPredicted RBP10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 MAP2K3P46734 347 aa10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 HCCSP53701 268 aa10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 ERVK11-1P61568 191 aa10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 PRAMEF5Q5TYX0 476 aa10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 ANGPTL5Q86XS5 388 aa10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 ZNF695Q8IW36 515 aa10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 OR52N4Q8NGI2 321 aa10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 THEM6Q8WUY1 208 aa10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 GPR173Q9NS66 373 aa10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 IL36RNQ9UBH0 155 aa10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 NKX1-2Q9UD57 310 aaPredicted RBP10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 ZMAT5Q9UDW3 170 aaKnown RBP10.05□□□□□ -0.8
PRKCSH-210ENST00000589990 ZAR1LA6NP61 321 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 PRR32B1ATL7 298 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 SEC14L6B5MCN3 397 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 INMTO95050 263 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 IGHA1P01876 353 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 LYNP07948 512 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 IL18R1Q13478 541 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 SLX4IPQ5VYV7 408 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 PLBD1Q6P4A8 553 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 GDPD3Q7L5L3 318 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 CPOQ8IVL8 374 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 TCEANCQ8N8B7 351 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 OTOSQ8NHW6 89 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 OR51E1Q8TCB6 317 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 TEAD3Q99594 435 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 GABARAPL3Q9BY60 117 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 PRRG3Q9BZD7 231 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 CHST6Q9GZX3 395 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 OR51V1Q9H2C8 321 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 NIPAL2Q9H841 368 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 GPR84Q9NQS5 396 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 FAM206AQ9NX38 181 aa10.04□□□□□ -0.8
PRKCSH-210ENST00000589990 DPM3Q9P2X0 92 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms