RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 RPL23AP62750 156 aaKnown RBP12.72□□□□□ -0.37
RETREG3-208ENST00000589797 STPG1Q5TH74 334 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 CXorf58Q96LI9 332 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 IER2Q9BTL4 223 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 KRASP01116 189 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 FTH1P19P0C7X4 201 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 GNG3P63215 75 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 TEX30Q5JUR7 227 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 LPCAT3Q6P1A2 487 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 RNF144BQ7Z419 303 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 TPRX1Q8N7U7 411 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 C2orf50Q96LR7 162 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 SF3B5Q9BWJ5 86 aaKnown RBP12.72□□□□□ -0.37
RETREG3-208ENST00000589797 PDCD6O75340 191 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 H2BFSP57053 126 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 OR2F1Q13607 317 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 FHL1Q13642 323 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 TCTEX1D2Q8WW35 142 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 OR2J1Q9GZK6 312 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 CHST5Q9GZS9 411 aa12.72□□□□□ -0.37
RETREG3-208ENST00000589797 IGLV3-12A0A075B6K2 115 aa12.71□□□□□ -0.37
RETREG3-208ENST00000589797 CBR1P16152 277 aa12.71□□□□□ -0.37
RETREG3-208ENST00000589797 BCL3P20749 454 aa12.71□□□□□ -0.37
RETREG3-208ENST00000589797 ZNF239Q16600 458 aaKnown RBP12.71□□□□□ -0.37
RETREG3-208ENST00000589797 TMEM182Q6ZP80 229 aaPredicted RBP12.71□□□□□ -0.37
RETREG3-208ENST00000589797 ADAT1Q9BUB4 502 aaKnown RBP12.71□□□□□ -0.37
RETREG3-208ENST00000589797 ANXA10Q9UJ72 324 aa12.71□□□□□ -0.37
RETREG3-208ENST00000589797 C5orf63A6NC05 138 aa12.71□□□□□ -0.37
RETREG3-208ENST00000589797 HPNP05981 417 aa12.71□□□□□ -0.37
RETREG3-208ENST00000589797 OR13C7P0DN81 318 aa12.71□□□□□ -0.37
RETREG3-208ENST00000589797 C2orf68Q2NKX9 166 aa12.71□□□□□ -0.37
RETREG3-208ENST00000589797 DEPPQ9NTK1 212 aa12.71□□□□□ -0.37
RETREG3-208ENST00000589797 CXCL2P19875 107 aa12.71□□□□□ -0.38
RETREG3-208ENST00000589797 PNLIPRP3Q17RR3 467 aa12.71□□□□□ -0.38
RETREG3-208ENST00000589797 SFT2D1Q8WV19 159 aa12.71□□□□□ -0.38
RETREG3-208ENST00000589797 MARC2Q969Z3 335 aa12.71□□□□□ -0.38
RETREG3-208ENST00000589797 C21orf140B9A014 251 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 IFNA4P05014 189 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 ELLP55199 621 aaPredicted RBP12.7□□□□□ -0.38
RETREG3-208ENST00000589797 RNPS1Q15287 305 aaKnown RBP12.7□□□□□ -0.38
RETREG3-208ENST00000589797 IGFBP7Q16270 282 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 ZNF260Q3ZCT1 412 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 OR2W3Q7Z3T1 314 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 FAM58AQ8N1B3 248 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 OR14K1Q8NGZ2 314 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 C9orf172C9J069 976 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 SH2D1BO14796 132 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 NPBWR2P48146 333 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 ZNF816Q0VGE8 651 aaPredicted RBP12.7□□□□□ -0.38
RETREG3-208ENST00000589797 UNC119Q13432 240 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 ZNF718Q3SXZ3 478 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 NUFIP2Q7Z417 695 aaKnown RBP12.7□□□□□ -0.38
RETREG3-208ENST00000589797 MDP1Q86V88 176 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 ZNF441Q8N8Z8 693 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 ABHD5Q8WTS1 349 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 PIEZO1Q92508 2521 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 TLN1Q9Y490 2541 aaKnown RBP12.7□□□□□ -0.38
RETREG3-208ENST00000589797 A0A0U1RQK1 487 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 PRRG2O14669 202 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 SOX15O60248 233 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 DUS4LO95620 317 aaKnown RBP12.7□□□□□ -0.38
RETREG3-208ENST00000589797 TBPP20226 339 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 PTGER4P35408 488 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 PDZK1IP1Q13113 114 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 OR11L1Q8NGX0 322 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 SPACA1Q9HBV2 294 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 TMEM100Q9NV29 134 aa12.7□□□□□ -0.38
RETREG3-208ENST00000589797 MKRN2OSH3BPM6 223 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 ACTL6BO94805 426 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 CST2P09228 141 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 GABRA1P14867 456 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 ZNF14P17017 642 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-208ENST00000589797 SSBP1Q04837 148 aaKnown RBP12.69□□□□□ -0.38
RETREG3-208ENST00000589797 TESK1Q15569 626 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 H3F3CQ6NXT2 135 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 OR5M8Q8NGP6 311 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 ANGPTL6Q8NI99 470 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 LRRC46Q96FV0 321 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 FAM212BQ9NTI7 297 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-208ENST00000589797 ZFP57Q9NU63 452 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 POLDIP2Q9Y2S7 368 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 TRGV8A0A0C4DH27 118 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 FOXG1P55316 489 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-208ENST00000589797 P2RX3P56373 397 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 SCAND1P57086 179 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 GGNBP1Q5YKI7 109 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 JMJD6Q6NYC1 403 aaPredicted RBP12.69□□□□□ -0.38
RETREG3-208ENST00000589797 GPR27Q9NS67 375 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 PCNX3Q9H6A9 2034 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 IFNA10P01566 189 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 ERVK-16P61578 105 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 AANATQ16613 207 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 SPINK9Q5DT21 86 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 Q6ZRG5 221 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 SPICQ8N5J4 248 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 OR2G3Q8NGZ4 309 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 CNTNAP3Q9BZ76 1288 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 PINLYPA6NC86 204 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 SFT2D2O95562 160 aa12.69□□□□□ -0.38
RETREG3-208ENST00000589797 TNFSF4P23510 183 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms