RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 HDHD3Q9BSH5 251 aaPredicted RBP7.5□□□□□ -1.21
SMAD4-206ENST00000588860 FAAP24Q9BTP7 215 aa7.5□□□□□ -1.21
SMAD4-206ENST00000588860 RTL8AQ9BWD3 113 aa7.5□□□□□ -1.21
SMAD4-206ENST00000588860 SFXN3Q9BWM7 321 aa7.5□□□□□ -1.21
SMAD4-206ENST00000588860 HSF4Q9ULV5 492 aa7.5□□□□□ -1.21
SMAD4-206ENST00000588860 VSIG4Q9Y279 399 aa7.5□□□□□ -1.21
SMAD4-206ENST00000588860 NOP16Q9Y3C1 178 aaKnown RBP7.5□□□□□ -1.21
SMAD4-206ENST00000588860 IGHV1-18A0A0C4DH31 117 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 OR2AT4A6NND4 320 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 IQCF6A8MYZ5 107 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 ERVH48-1M5A8F1 160 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 FABP7O15540 132 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 SYNGR1O43759 233 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 IGLV1-44P01699 117 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 OR4E1P0C645 316 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 ZNF35P13682 527 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 RAC2P15153 192 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 ERP29P30040 261 aaKnown RBP7.49□□□□□ -1.21
SMAD4-206ENST00000588860 CEACAM8P31997 349 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-206ENST00000588860 MPV17P39210 176 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 OR3A3P47888 321 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 GZMKP49863 264 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 ZNF83P51522 516 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 ARPC4P59998 168 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 FGF12P61328 243 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 TSPAN5P62079 268 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 PDCD1Q15116 288 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 OR8G1Q15617 311 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 IGFBP7Q16270 282 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 PRR30Q53SZ7 412 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-206ENST00000588860 ELP2Q6IA86 826 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 ALKBH2Q6NS38 261 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 ZNF474Q6S9Z5 364 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-206ENST00000588860 UNQ6126/PRO20091Q6UXV3 157 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 C17orf107Q6ZR85 190 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 NLRC3Q7RTR2 1065 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 TMEM200AQ86VY9 491 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 ZNF573Q86YE8 665 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 LIX1LQ8IVB5 337 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 MUC20Q8N307 709 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-206ENST00000588860 UXS1Q8NBZ7 420 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 OR10AD1Q8NGE0 317 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 ZNF431Q8TF32 576 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-206ENST00000588860 S100PBPQ96BU1 408 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 ADAT1Q9BUB4 502 aaKnown RBP7.49□□□□□ -1.21
SMAD4-206ENST00000588860 CHIAQ9BZP6 476 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 PKIBQ9C010 78 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 PPA2Q9H2U2 334 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 MYOZ1Q9NP98 299 aaPredicted RBP7.49□□□□□ -1.21
SMAD4-206ENST00000588860 EHFQ9NZC4 300 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 SLC25A15Q9Y619 301 aa7.49□□□□□ -1.21
SMAD4-206ENST00000588860 PRRC2CQ9Y520 2896 aaKnown RBP7.48□□□□□ -1.21
SMAD4-206ENST00000588860 IGHV2OR16-5A0A0B4J2B6 119 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 LRP5LA4QPB2 252 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM172BPA6NC97 362 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM90A10PA6NDY2 464 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM90A18PA6NE21 464 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM90A16PA6NEW6 464 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM90A20PA6NIJ5 464 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM90A8PA6NJQ4 464 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM90A7PA6NKC0 464 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM90A22PA8MWA6 464 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM90A12PA8MX19 464 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM90A5PA8MXJ8 464 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM90A23PA8MXZ1 464 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 EEF1E1-BLOC1S5C9J1V9 151 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 F8VVB4 439 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 F8VWA3 439 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 J3QT63 122 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 M0R1B8 84 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 SDCBPO00560 298 aaPredicted RBP7.48□□□□□ -1.21
SMAD4-206ENST00000588860 GOSR2O14653 212 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 MSTNO14793 375 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 OR7C1O76099 320 aaPredicted RBP7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FCGR3AP08637 254 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM90A15PP0C7V4 464 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM90A13PP0C7W8 464 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM90A14PP0C7W9 464 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FAM90A24PP0C7X0 464 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 PRKACAP17612 351 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 FUT3P21217 361 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 DTYMKP23919 212 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 CALCRP30988 508 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 TAS2R31P59538 309 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 UBE2MP61081 183 aaKnown RBP7.48□□□□□ -1.21
SMAD4-206ENST00000588860 IL24Q13007 206 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 PSG7Q13046 419 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 CDK10Q15131 360 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 ALKBH6Q3KRA9 238 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 SEZ6L2Q6UXD5 910 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 TMEM17Q86X19 198 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 DOLPP1Q86YN1 238 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 ARRDC1Q8N5I2 433 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 C12orf45Q8N5I9 185 aaPredicted RBP7.48□□□□□ -1.21
SMAD4-206ENST00000588860 SPICQ8N5J4 248 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 OR2AK2Q8NG84 335 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 OR5AP2Q8NGF4 316 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 OR13G1Q8NGZ3 307 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 ZFAND1Q8TCF1 268 aa7.48□□□□□ -1.21
SMAD4-206ENST00000588860 MARCH1Q8TCQ1 289 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms