RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 RAB22AQ9UL26 194 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 AMDHD2Q9Y303 409 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 CR1P17927 2039 aa8.71□□□□□ -1.02
SS18-221ENST00000582448 LOC100509620A0A075B734 347 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 TMEM272A0A1B0GTI8 110 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 A0A1B0GVG6 124 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 GABARAPH6UMI1 98 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 KDM4BO94953 1096 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 NRASP01111 189 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 COX5AP20674 150 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 CDK2P24941 298 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 ATP1B3P54709 279 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 MTCP1P56278 107 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 TAS2R20P59543 309 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 GPR176Q14439 515 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 KISS1Q15726 138 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 C1QTNF12Q5T7M4 302 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 CYB5R2Q6BCY4 276 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 CLEC2AQ6UVW9 174 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 GLIPR1L1Q6UWM5 242 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 COLCA1Q6ZS62 124 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 LHFPL2Q6ZUX7 228 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 KRT74Q7RTS7 529 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 ANGPTL5Q86XS5 388 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 SMIM4Q8WVI0 70 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 SPSB4Q96A44 273 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 BORCS8Q96FH0 119 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 BOD1Q96IK1 185 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 ABHD1Q96SE0 405 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 C7orf50Q9BRJ6 194 aaKnown RBP8.7□□□□□ -1.02
SS18-221ENST00000582448 URM1Q9BTM9 101 aaKnown RBP8.7□□□□□ -1.02
SS18-221ENST00000582448 TRAF4Q9BUZ4 470 aaPredicted RBP8.7□□□□□ -1.02
SS18-221ENST00000582448 CACNG6Q9BXT2 260 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 CHODLQ9H9P2 273 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 FAIMQ9NVQ4 179 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 B3GNT2Q9NY97 397 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 TAS2R8Q9NYW2 309 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 ALPK2Q86TB3 2170 aa8.7□□□□□ -1.02
SS18-221ENST00000582448 TRAV18A0A075B6X5 111 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 hCG_38984A0A1B0GV85 526 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 FAM240BA0A1B0GVZ2 78 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 ANKRD30BLA7E2S9 258 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 LYRM1O43325 122 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 CDC14BO60729 498 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 CHRM2P08172 466 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 CBR1P16152 277 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 SELEP16581 610 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 SRD5A1P18405 259 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 TUBG1P23258 451 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 PRSS3P35030 304 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 FAUP35544 74 aaKnown RBP8.69□□□□□ -1.02
SS18-221ENST00000582448 RBP2P50120 134 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 FUT6P51993 359 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 FAM3AP98173 230 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 ZNF92Q03936 586 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 HGFACQ04756 655 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 OR8B8Q15620 311 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 RNASE12Q5GAN4 147 aaKnown RBP8.69□□□□□ -1.02
SS18-221ENST00000582448 PLCXD3Q63HM9 321 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 PLET1Q6UQ28 207 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 DNM1P46Q6ZS02 220 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 BHLHA15Q7RTS1 189 aaPredicted RBP8.69□□□□□ -1.02
SS18-221ENST00000582448 IZUMO1Q8IYV9 350 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 OR5AS1Q8N127 324 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 GABRG1Q8N1C3 465 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 OR4D6Q8NGJ1 314 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 NPRL2Q8WTW4 380 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 TNFAIP8L1Q8WVP5 186 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 PIGCQ92535 297 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 C16orf92Q96LL3 132 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 SOX7Q9BT81 388 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 ELL3Q9HB65 397 aaPredicted RBP8.69□□□□□ -1.02
SS18-221ENST00000582448 TUBG2Q9NRH3 451 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 GPR173Q9NS66 373 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 PTTG3PQ9NZH4 202 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 LPAR3Q9UBY5 353 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 POU2F3Q9UKI9 436 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 ING4Q9UNL4 249 aa8.69□□□□□ -1.02
SS18-221ENST00000582448 FAM230AA0A1W2PPH8 454 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 C5orf63A6NC05 138 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 NAP1L6A6NFF2 107 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 GMDSO60547 372 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 ZNF780AO75290 641 aaPredicted RBP8.68□□□□□ -1.02
SS18-221ENST00000582448 CRTAPO75718 401 aaPredicted RBP8.68□□□□□ -1.02
SS18-221ENST00000582448 RBBP9O75884 186 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 CYB5AP00167 134 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 CSTBP04080 98 aaKnown RBP8.68□□□□□ -1.02
SS18-221ENST00000582448 CSF1P09603 554 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 CD3GP09693 182 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 TMEM225BP0DP42 221 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 CCL2P13500 99 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 PTGFRP43088 359 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 RAD52P43351 418 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 IDH3GP51553 393 aaPredicted RBP8.68□□□□□ -1.02
SS18-221ENST00000582448 ACTBP60709 375 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 ACTG1P63261 375 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 SSBP1Q04837 148 aaKnown RBP8.68□□□□□ -1.02
SS18-221ENST00000582448 GK2Q14410 553 aaPredicted RBP8.68□□□□□ -1.02
SS18-221ENST00000582448 ARL6IP1Q15041 203 aa8.68□□□□□ -1.02
SS18-221ENST00000582448 UBE2V2Q15819 145 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms