RNA–Protein interactions for RNA: ENST00000581631.1

SMCHD1-206, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 729 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-206ENST00000581631 UPK1AO00322 258 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 CASQ2O14958 399 aaPredicted RBP0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 HSBP1O75506 76 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 S1PR2O95136 353 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 STAG3L3P0CL85 134 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 ZNF140P52738 457 aaPredicted RBP0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 PSMD4P55036 377 aaKnown RBP0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 MLF1P58340 268 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 PSG4Q00888 419 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 BCL2A1Q16548 175 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 TTC32Q5I0X7 151 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 TPRG1LQ5T0D9 272 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 CLEC19AQ6UXS0 136 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 LYZL2Q7Z4W2 148 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 CYP4Z2PQ8N1L4 340 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 ZNF738Q8NE65 137 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 OR8K1Q8NGG5 319 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 NDNFQ8TB73 568 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 TOP1MTQ969P6 601 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 SMIM8Q96KF7 97 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 TXNDC17Q9BRA2 123 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 TTTY12Q9BZ98 90 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 ASB7Q9H672 318 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 DDX18Q9NVP1 670 aaKnown RBP0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 RBM12B-AS1Q9P1G2 102 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 FADS3Q9Y5Q0 445 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 INSIG2Q9Y5U4 225 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 KPTNQ9Y664 436 aa0.85□□□□□ -2.27
SMCHD1-206ENST00000581631 K7EN84 100 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 CRTAPO75718 401 aaPredicted RBP0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 CTLA4P16410 223 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 HOXB8P17481 243 aaPredicted RBP0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 SRMP19623 302 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 M6PRP20645 277 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 COILP38432 576 aaPredicted RBP0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 CCT6AP40227 531 aaKnown RBP0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 BCAP31P51572 246 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 DAOAP59103 153 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 YWHAEP62258 255 aaKnown RBP0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 IFFO1Q0D2I5 559 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 SSX1Q16384 188 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 NDUFAF6Q330K2 333 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 TTMPQ5BVD1 217 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 NOXRED1Q6NXP6 359 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 TMCO2Q7Z6W1 182 aaPredicted RBP0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 MARCH3Q86UD3 253 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 BBOF1Q8ND07 529 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 OR2V1Q8NHB1 315 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 ZNF436Q9C0F3 470 aaPredicted RBP0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 FBXO44Q9H4M3 255 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 OR5V1Q9UGF6 321 aa0.84□□□□□ -2.27
SMCHD1-206ENST00000581631 CACNA1GO43497 2377 aa0.84□□□□□ -2.28
SMCHD1-206ENST00000581631 NEURL4Q96JN8 1562 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 GOLGA6L7A0A1B0GV03 622 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 FAM240AA0A1B0GVK7 77 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 TVP23AA6NH52 213 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 GMDSO60547 372 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 TRAPPC6AO75865 159 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 LIPCP11150 499 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 IMPA1P29218 277 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 RPL31P62899 125 aaKnown RBP0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 FAM27D1Q5T7N8 215 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 ZNF773Q6PK81 442 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 OR2W3Q7Z3T1 314 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 SETD3Q86TU7 594 aaPredicted RBP0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 LINC00596Q86U02 117 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 CCNYL1Q8N7R7 359 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 FBXO36Q8NEA4 188 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 OR52K2Q8NGK3 314 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 OR4A15Q8NGL6 344 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 OR51A7Q8NH64 312 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 MAL2Q969L2 176 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 NAP1L5Q96NT1 182 aaPredicted RBP0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 TMED9Q9BVK6 235 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 TSSK6Q9BXA6 273 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 BEX2Q9BXY8 128 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 KIR3DX1Q9H7L2 352 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 CHTOPQ9Y3Y2 248 aaKnown RBP0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 ADGRB3O60242 1522 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 SBNO1A3KN83 1393 aa0.83□□□□□ -2.28
SMCHD1-206ENST00000581631 RNF113AO15541 343 aaKnown RBP0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 HLA-AP01891 365 aaKnown RBP0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 OPN1SWP03999 348 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 GTF2F2P13984 249 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 P2RY2P41231 377 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 MAGEA1P43355 309 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 ATP5J2P56134 94 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 ST3GAL4Q11206 333 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 PRDX4Q13162 271 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 DYNC1I2Q13409 638 aaKnown RBP0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 DOC2AQ14183 400 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 CDNFQ49AH0 187 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 CLLU1OSQ5K130 101 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 ULK3Q6PHR2 472 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 Q6ZRU5 148 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 DPPA2Q7Z7J5 298 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 OR5C1Q8NGR4 320 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 UBA3Q8TBC4 463 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 CACNG8Q8WXS5 425 aa0.82□□□□□ -2.28
SMCHD1-206ENST00000581631 METTL26Q96S19 204 aa0.82□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms