RNA–Protein interactions for RNA: ENST00000581570.5

SS18-219, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-219ENST00000581570 PRR23D1E9PI22 279 aaPredicted RBP10.02□□□□□ -0.81
SS18-219ENST00000581570 LY6LH3BQJ8 138 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 BUB1B-PAK6H3BSN5 160 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 CCDC22O60826 627 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 IGHA1P01876 353 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 PRR23D2P0DMB1 279 aaPredicted RBP10.02□□□□□ -0.81
SS18-219ENST00000581570 CDK2P24941 298 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 HCCSP53701 268 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 KIR2DS1Q14954 304 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 HLA-DRB5Q30154 266 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 DEFB136Q30KP8 78 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 DEGS2Q6QHC5 323 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 LCNL1Q6ZST4 164 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 THNSL2Q86YJ6 484 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 EGFL6Q8IUX8 553 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 OR8U1Q8NH10 309 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 TEX47Q8TBZ9 253 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 CEP19Q96LK0 163 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 DGCR6LQ9BY27 220 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 MROQ9BYG7 248 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 ZMAT4Q9H898 229 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 MTCH1Q9NZJ7 389 aa10.02□□□□□ -0.81
SS18-219ENST00000581570 NUFIP1Q9UHK0 495 aaKnown RBP10.02□□□□□ -0.81
SS18-219ENST00000581570 FAM230AA0A1W2PPH8 454 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 FAM90A18PA6NE21 464 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 FAM90A16PA6NEW6 464 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 FAM90A20PA6NIJ5 464 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 FAM90A9PA6NNJ1 464 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 FAM90A12PA8MX19 464 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 FAM90A5PA8MXJ8 464 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 OOSP1A8MZH6 123 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 MGST3O14880 152 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 PSPNO60542 156 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 HAND1O96004 215 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 FAM90A15PP0C7V4 464 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 FAM90A13PP0C7W8 464 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 FAM90A14PP0C7W9 464 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 FAM90A24PP0C7X0 464 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 PRRX1P54821 245 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 RBM39Q14498 530 aaKnown RBP10.01□□□□□ -0.81
SS18-219ENST00000581570 ZNF829Q3KNS6 432 aaPredicted RBP10.01□□□□□ -0.81
SS18-219ENST00000581570 ZNF260Q3ZCT1 412 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 TEX38Q6PEX7 206 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 HEPN1Q6WQI6 88 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 OVCH2Q7RTZ1 564 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 SLC35E3Q7Z769 313 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 FOXRED2Q8IWF2 684 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 STPG2Q8N412 459 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 C5orf56Q8N8D9 126 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 SLAMF9Q96A28 289 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 CITED4Q96RK1 184 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 GAL3ST2Q9H3Q3 398 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 SEBOXQ9HB31 216 aaPredicted RBP10.01□□□□□ -0.81
SS18-219ENST00000581570 ZNF286AQ9HBT8 521 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 NKX1-2Q9UD57 310 aaPredicted RBP10.01□□□□□ -0.81
SS18-219ENST00000581570 GLS2Q9UI32 602 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 V9GYS6 101 aa10.01□□□□□ -0.81
SS18-219ENST00000581570 TRGV10A0A0A0MS01 117 aa10□□□□□ -0.81
SS18-219ENST00000581570 H3BN98 237 aa10□□□□□ -0.81
SS18-219ENST00000581570 ARPC2O15144 300 aa10□□□□□ -0.81
SS18-219ENST00000581570 PRODHO43272 600 aa10□□□□□ -0.81
SS18-219ENST00000581570 ZNF254O75437 659 aa10□□□□□ -0.81
SS18-219ENST00000581570 IGHG2P01859 326 aa10□□□□□ -0.81
SS18-219ENST00000581570 TTRP02766 147 aa10□□□□□ -0.81
SS18-219ENST00000581570 RPLP1P05386 114 aaKnown RBP10□□□□□ -0.81
SS18-219ENST00000581570 HSD17B1P14061 328 aa10□□□□□ -0.81
SS18-219ENST00000581570 TMEM11P17152 192 aa10□□□□□ -0.81
SS18-219ENST00000581570 CD34P28906 385 aa10□□□□□ -0.81
SS18-219ENST00000581570 ERP29P30040 261 aaKnown RBP10□□□□□ -0.81
SS18-219ENST00000581570 GDNFP39905 211 aa10□□□□□ -0.81
SS18-219ENST00000581570 P2RX3P56373 397 aa10□□□□□ -0.81
SS18-219ENST00000581570 RPS7P62081 194 aaKnown RBP10□□□□□ -0.81
SS18-219ENST00000581570 HES1Q14469 280 aa10□□□□□ -0.81
SS18-219ENST00000581570 KPNB1Q14974 876 aaKnown RBP10□□□□□ -0.81
SS18-219ENST00000581570 PNLIPRP3Q17RR3 467 aa10□□□□□ -0.81
SS18-219ENST00000581570 MICAQ29983 383 aa10□□□□□ -0.81
SS18-219ENST00000581570 ADAMTSL5Q6ZMM2 481 aa10□□□□□ -0.81
SS18-219ENST00000581570 ENTHD1Q8IYW4 607 aa10□□□□□ -0.81
SS18-219ENST00000581570 OR14K1Q8NGZ2 314 aa10□□□□□ -0.81
SS18-219ENST00000581570 EMG1Q92979 244 aaKnown RBP10□□□□□ -0.81
SS18-219ENST00000581570 CMTM5Q96DZ9 223 aa10□□□□□ -0.81
SS18-219ENST00000581570 CADM1Q9BY67 442 aaKnown RBP10□□□□□ -0.81
SS18-219ENST00000581570 YIPF3Q9GZM5 350 aa10□□□□□ -0.81
SS18-219ENST00000581570 TAS2R3Q9NYW6 316 aa10□□□□□ -0.81
SS18-219ENST00000581570 GTF2A1LQ9UNN4 478 aa10□□□□□ -0.81
SS18-219ENST00000581570 SLC7A11Q9UPY5 501 aa10□□□□□ -0.81
SS18-219ENST00000581570 SIRT4Q9Y6E7 314 aaPredicted RBP10□□□□□ -0.81
SS18-219ENST00000581570 FGF16O43320 207 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 DUSP1P28562 367 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 CDX1P47902 265 aaPredicted RBP9.99□□□□□ -0.81
SS18-219ENST00000581570 RIDAP52758 137 aaKnown RBP9.99□□□□□ -0.81
SS18-219ENST00000581570 ZNF91Q05481 1191 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 MFGE8Q08431 387 aaPredicted RBP9.99□□□□□ -0.81
SS18-219ENST00000581570 HNF4GQ14541 408 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 CXorf66Q5JRM2 361 aaPredicted RBP9.99□□□□□ -0.81
SS18-219ENST00000581570 SLC35D3Q5M8T2 416 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 CPOQ8IVL8 374 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 ZNF679Q8IYX0 411 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 DRAM1Q8N682 238 aa9.99□□□□□ -0.81
SS18-219ENST00000581570 OR56B4Q8NH76 319 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms