RNA–Protein interactions for RNA: ENST00000577636.5

SS18-207, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 3

Gene SS18, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-207ENST00000577636 RFPL4BQ6ZWI9 263 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 ZNF573Q86YE8 665 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 MKXQ8IYA7 352 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 WDR31Q8NA23 367 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 ZSCAN4Q8NAM6 433 aaPredicted RBP8.64□□□□□ -1.03
SS18-207ENST00000577636 DUSP18Q8NEJ0 188 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 OR5A2Q8NGI9 324 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 OR8S1Q8NH09 359 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 UBASH3BQ8TF42 649 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 CREB3L1Q96BA8 519 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 CMBLQ96DG6 245 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 ZNF75AQ96N20 296 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 DHRS9Q9BPW9 319 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 MICU1Q9BPX6 476 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 RTL8AQ9BWD3 113 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 SELENOIQ9C0D9 397 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 IFT46Q9NQC8 304 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 MCUBQ9NWR8 336 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 MRPL15Q9P015 296 aaKnown RBP8.64□□□□□ -1.03
SS18-207ENST00000577636 NLKQ9UBE8 527 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 MTFP1Q9UDX5 166 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 ZNF107Q9UII5 783 aaPredicted RBP8.64□□□□□ -1.03
SS18-207ENST00000577636 RBMX2Q9Y388 322 aaKnown RBP8.64□□□□□ -1.03
SS18-207ENST00000577636 NUBP2Q9Y5Y2 271 aa8.64□□□□□ -1.03
SS18-207ENST00000577636 ANKRD20A5PA0PJZ0 165 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 PLATP00750 562 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 CELA3BP08861 270 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 AKAIN1P0CW23 69 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 SPNP16150 400 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 HNF1AP20823 631 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 SLC6A1P30531 599 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 CBX5P45973 191 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 SRP9P49458 86 aaKnown RBP8.63□□□□□ -1.03
SS18-207ENST00000577636 PRSS12P56730 875 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 TAS2R19P59542 299 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 MZT1Q08AG7 82 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 PDZK1IP1Q13113 114 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 KLF9Q13886 244 aaPredicted RBP8.63□□□□□ -1.03
SS18-207ENST00000577636 PNLIPRP3Q17RR3 467 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 ZNF718Q3SXZ3 478 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 SPATA46Q5T0L3 261 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 C11orf71Q6IPW1 123 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 TMEM108Q6UXF1 575 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 C12orf54Q6X4T0 127 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 SAXO1Q8IYX7 474 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 PAQR4Q8N4S7 273 aaPredicted RBP8.63□□□□□ -1.03
SS18-207ENST00000577636 BHLHE23Q8NDY6 225 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 PXT1Q8NFP0 134 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 OR51F2Q8NH61 342 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 C10orf105Q8TEF2 133 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 C1orf159Q96HA4 380 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 RADILQ96JH8 1075 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 RNF170Q96K19 258 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 NEDD4LQ96PU5 975 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 LPAR5Q9H1C0 372 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 BANF2Q9H503 90 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 IL36GQ9NZH8 169 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 KLK11Q9UBX7 282 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 GPR160Q9UJ42 338 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 SLC25A15Q9Y619 301 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 CADP27708 2225 aa8.63□□□□□ -1.03
SS18-207ENST00000577636 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.63□□□□□ -1.031e-8■■■■□ 23.5
SS18-207ENST00000577636 PQLC2LA1A4F0 135 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 SERPINE3A8MV23 424 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 ZNF736B4DX44 427 aaPredicted RBP8.62□□□□□ -1.03
SS18-207ENST00000577636 TRAPPC2LH3BP13 241 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 RAB27BO00194 218 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 TGFAP01135 160 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 IGLV1-44P01699 117 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 MT-ND4P03905 459 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 CECR9P0C854 216 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 HIST1H1DP16402 221 aaKnown RBP8.62□□□□□ -1.03
SS18-207ENST00000577636 GPM6AP51674 278 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 EFNA4P52798 201 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 SELENOVP59797 346 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 RPS23P62266 143 aaKnown RBP8.62□□□□□ -1.03
SS18-207ENST00000577636 GNG3P63215 75 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 ARFRP1Q13795 201 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 DMRTC1Q5HYR2 192 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 OR2T2Q6IF00 324 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 ASCL4Q6XD76 172 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 TRAPPC6BQ86SZ2 158 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 ZNF554Q86TJ5 538 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 OSR2Q8N2R0 312 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 TMEM104Q8NE00 496 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 OR10K1Q8NGX5 313 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 SLC25A40Q8TBP6 338 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 GPX8Q8TED1 209 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 OR5P3Q8WZ94 311 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 AQP3Q92482 292 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 GCDHQ92947 438 aaPredicted RBP8.62□□□□□ -1.03
SS18-207ENST00000577636 MSI2Q96DH6 328 aaKnown RBP8.62□□□□□ -1.03
SS18-207ENST00000577636 SEH1LQ96EE3 360 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 C1orf147Q96MC9 270 aaPredicted RBP8.62□□□□□ -1.03
SS18-207ENST00000577636 TM2D1Q9BX74 207 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 OR2J1Q9GZK6 312 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 MMP28Q9H239 520 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 HRASLSQ9HDD0 168 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 SVEP1Q4LDE5 3571 aa8.62□□□□□ -1.03
SS18-207ENST00000577636 FREM1Q5H8C1 2179 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms