RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 OSR2Q8N2R0 312 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 HPSE2Q8WWQ2 592 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 PBDC1Q9BVG4 233 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 SLC35B3Q9H1N7 401 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 BCO1Q9HAY6 547 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 DKKL1Q9UK85 242 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 IGKV1-12A0A0C4DH73 117 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 hCG_1809904A0A1W2PP81 198 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 A0A1W2PR64 198 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 A0A1W2PRV1 198 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 SYNGR3O43761 229 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 NRASP01111 189 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 IGKV1D-12P01611 117 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 LIFP15018 202 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 RAB5AP20339 215 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 DSCR4P56555 118 aaPredicted RBP13.57□□□□□ -0.24
NUP88-207ENST00000573584 FABP9Q0Z7S8 132 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 PCOLCEQ15113 449 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 PDCD1Q15116 288 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 MRPL14Q6P1L8 145 aaKnown RBP13.57□□□□□ -0.24
NUP88-207ENST00000573584 LHFPL2Q6ZUX7 228 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 FAM24BQ8N5W8 94 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 CCDC74BQ96LY2 380 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 ZNF286AQ9HBT8 521 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 ST3GAL6Q9Y274 331 aa13.57□□□□□ -0.24
NUP88-207ENST00000573584 RCL1Q9Y2P8 373 aaKnown RBP13.57□□□□□ -0.24
NUP88-207ENST00000573584 EML6Q6ZMW3 1958 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 A0A0J9YW62 118 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 ARG1P05089 322 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 ASCL1P50553 236 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 GNMTQ14749 295 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 COL19A1Q14993 1142 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 ASCL4Q6XD76 172 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 MEX3BQ6ZN04 569 aaKnown RBP13.56□□□□□ -0.24
NUP88-207ENST00000573584 OR1J1Q8NGS3 322 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 OR1F12Q8NHA8 337 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 MOB3AQ96BX8 217 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 ZNF576Q9H609 170 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 TERTO14746 1132 aaKnown RBP13.56□□□□□ -0.24
NUP88-207ENST00000573584 PATE4P0C8F1 98 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 OR13C7P0DN81 318 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 SULT1A1P50225 295 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 ADAM5Q6NVV9 412 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 TMEM182Q6ZP80 229 aaPredicted RBP13.56□□□□□ -0.24
NUP88-207ENST00000573584 FAM213BQ8TBF2 198 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 CRLF2Q9HC73 371 aa13.56□□□□□ -0.24
NUP88-207ENST00000573584 MRPS17Q9Y2R5 130 aaKnown RBP13.56□□□□□ -0.24
NUP88-207ENST00000573584 NOVA1P51513 510 aaKnown RBP13.55□□□□□ -0.24
NUP88-207ENST00000573584 SLC35G3Q8N808 338 aa13.55□□□□□ -0.24
NUP88-207ENST00000573584 PROK2Q9HC23 129 aa13.55□□□□□ -0.24
NUP88-207ENST00000573584 TMED3Q9Y3Q3 217 aa13.55□□□□□ -0.24
NUP88-207ENST00000573584 LMO1P25800 156 aa13.55□□□□□ -0.24
NUP88-207ENST00000573584 PMELP40967 661 aa13.55□□□□□ -0.24
NUP88-207ENST00000573584 HERV-K104P61576 105 aa13.55□□□□□ -0.24
NUP88-207ENST00000573584 RHEBQ15382 184 aa13.55□□□□□ -0.24
NUP88-207ENST00000573584 CCDC71LQ8N9Z2 235 aa13.55□□□□□ -0.24
NUP88-207ENST00000573584 AKR7LQ8NHP1 331 aa13.55□□□□□ -0.24
NUP88-207ENST00000573584 SLC39A7Q92504 469 aa13.55□□□□□ -0.24
NUP88-207ENST00000573584 TP53RKQ96S44 253 aa13.55□□□□□ -0.24
NUP88-207ENST00000573584 PHF7Q9BWX1 381 aaPredicted RBP13.55□□□□□ -0.24
NUP88-207ENST00000573584 SRXN1Q9BYN0 137 aa13.55□□□□□ -0.24
NUP88-207ENST00000573584 OCIAD1Q9NX40 245 aa13.55□□□□□ -0.24
NUP88-207ENST00000573584 TCN2P20062 427 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 AADACP22760 399 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 PPP1CCP36873 323 aaKnown RBP13.54□□□□□ -0.24
NUP88-207ENST00000573584 UCP3P55916 312 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 MALLQ13021 153 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 CDCP2Q5VXM1 449 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 GPR137CQ8N3F9 429 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 RSRP1Q9BUV0 290 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 METTL1Q9UBP6 276 aaKnown RBP13.54□□□□□ -0.24
NUP88-207ENST00000573584 A0A1W2PPE2 198 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 GDF9O60383 454 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 IGFBP4P22692 258 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 OR2B8PP59922 312 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 RAC1P63000 192 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 EWSR1Q01844 656 aaKnown RBP eCLIP13.54□□□□□ -0.24
NUP88-207ENST00000573584 TSC22D1Q15714 1073 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 OR4D5Q8NGN0 318 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 TCEAL3Q969E4 200 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 ZNF251Q9BRH9 671 aa13.54□□□□□ -0.24
NUP88-207ENST00000573584 PDCD6O75340 191 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 B4GALT1P15291 398 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 ZNF32P17041 273 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 HTR5AP47898 357 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 CLINT1Q14677 625 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 TMEM42Q69YG0 159 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 LFNGQ8NES3 379 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 BOD1Q96IK1 185 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 RARRES2Q99969 163 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 ZNF442Q9H7R0 627 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 NIT2Q9NQR4 276 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 SHANK1Q9Y566 2161 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 FAM24AA6NFZ4 105 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 FABP1P07148 127 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 CST2P09228 141 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 NTF4P34130 210 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 OR2C3Q8N628 320 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 ZNF565Q8N9K5 539 aa13.53□□□□□ -0.24
NUP88-207ENST00000573584 SEBOXQ9HB31 216 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms