RNA–Protein interactions for RNA: ENST00000570189.5

MAP1LC3B-208, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 1,259 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-208ENST00000570189 RAB40BQ12829 278 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 PDZK1IP1Q13113 114 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ALKBH1Q13686 389 aaKnown RBP13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ZIK1Q3SY52 487 aaPredicted RBP13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ZNF626Q68DY1 528 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 TCF23Q7RTU1 214 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 SAXO1Q8IYX7 474 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 FAM58AQ8N1B3 248 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 OR13D1Q8NGV5 346 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 PIFOQ8TCI5 191 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 EMG1Q92979 244 aaKnown RBP13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 FOXRED1Q96CU9 486 aaPredicted RBP13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 C4orf36Q96KX1 117 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 OPALINQ96PE5 141 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 JAM3Q9BX67 310 aa13.86□□□□□ -0.19
MAP1LC3B-208ENST00000570189 TET2Q6N021 2002 aaPredicted RBP13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 hADV38S2A0JD32 116 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 H3BSH0 61 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 KDM4BO94953 1096 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 FADS2O95864 444 aaKnown RBP13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 IGHV1-8P0DP01 117 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ZNF20P17024 532 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 LMO1P25800 156 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 PEX2P28328 305 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 DYNLT3P51808 116 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 BMXP51813 675 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 MTCP1P56278 107 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 LGALS4P56470 323 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 SLC35E4Q6ICL7 350 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 BATF2Q8N1L9 274 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 FGGYQ96C11 551 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 MALSU1Q96EH3 234 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ZNF714Q96N38 554 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 RDH12Q96NR8 316 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 COMMD4Q9H0A8 199 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 S100A14Q9HCY8 104 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 HMG20AQ9NP66 347 aa13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 RBFOX1Q9NWB1 397 aaKnown RBP13.85□□□□□ -0.19
MAP1LC3B-208ENST00000570189 MEGF11A6BM72 1044 aa13.84□□□□□ -0.19
MAP1LC3B-208ENST00000570189 MGST3O14880 152 aa13.84□□□□□ -0.19
MAP1LC3B-208ENST00000570189 NPBWR2P48146 333 aa13.84□□□□□ -0.19
MAP1LC3B-208ENST00000570189 PQLC1Q8N2U9 271 aa13.84□□□□□ -0.19
MAP1LC3B-208ENST00000570189 PARP16Q8N5Y8 322 aa13.84□□□□□ -0.19
MAP1LC3B-208ENST00000570189 OR51A4Q8NGJ6 313 aa13.84□□□□□ -0.19
MAP1LC3B-208ENST00000570189 PPP1R35Q8TAP8 253 aa13.84□□□□□ -0.19
MAP1LC3B-208ENST00000570189 SLC29A1Q99808 456 aa13.84□□□□□ -0.19
MAP1LC3B-208ENST00000570189 ALG8Q9BVK2 526 aa13.84□□□□□ -0.19
MAP1LC3B-208ENST00000570189 PPA2Q9H2U2 334 aa13.84□□□□□ -0.19
MAP1LC3B-208ENST00000570189 NEK6Q9HC98 313 aa13.84□□□□□ -0.19
MAP1LC3B-208ENST00000570189 TCF7L1Q9HCS4 588 aa13.84□□□□□ -0.19
MAP1LC3B-208ENST00000570189 KIAA2026Q5HYC2 2103 aa13.84□□□□□ -0.19
MAP1LC3B-208ENST00000570189 LOC100130705A0A1B0GUX0 176 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 TMEM212A6NML5 194 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 J3QLW9 94 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 PSPNO60542 156 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 CSN2P05814 226 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 PIPP12273 146 aaPredicted RBP13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 ZNF19P17023 458 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 BCL3P20749 454 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 GABRA5P31644 462 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 EFNB2P52799 333 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 EDDM3BP56851 147 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 LPCAT4Q643R3 524 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 ZNF782Q6ZMW2 699 aaPredicted RBP13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 ZBTB49Q6ZSB9 765 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 OR52N4Q8NGI2 321 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 OR4C13Q8NGP0 309 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 OR13C3Q8NGS6 347 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 OR10AC1Q8NH08 325 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 FAM118AQ9NWS6 357 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 ERVK13-1Q9NX77 482 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 IL36RNQ9UBH0 155 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 GLS2Q9UI32 602 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 MYRFQ9Y2G1 1151 aa13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 UBE2J1Q9Y385 318 aaPredicted RBP13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 RPL36Q9Y3U8 105 aaKnown RBP13.83□□□□□ -0.2
MAP1LC3B-208ENST00000570189 IGKV1-12A0A0C4DH73 117 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 ZFPL1O95159 310 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 IGKV1D-12P01611 117 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 CCDC159P0C7I6 412 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 COX7A1P24310 79 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 OR3A1P47881 315 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 POU3F4P49335 361 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 GRK1Q15835 563 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 KLHL22Q53GT1 634 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 MINOS1Q5TGZ0 78 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 LHFPL4Q7Z7J7 247 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 LHFPL3Q86UP9 236 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 Q8N2B8 174 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 ZNF676Q8N7Q3 588 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 CHST4Q8NCG5 386 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 CORO2AQ92828 525 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 NPFFR1Q9GZQ6 430 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 ZCCHC4Q9H5U6 513 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 AASSQ9UDR5 926 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 SESN1Q9Y6P5 492 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 MINOS1-NBL1R4GNA1 71 aa13.82□□□□□ -0.2
MAP1LC3B-208ENST00000570189 EBAG9O00559 213 aa13.81□□□□□ -0.2
MAP1LC3B-208ENST00000570189 SH2D1BO14796 132 aa13.81□□□□□ -0.2
MAP1LC3B-208ENST00000570189 PRKACAP17612 351 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms