RNA–Protein interactions for RNA: ENST00000566549.5

MSLN-207, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,418 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-207ENST00000566549 IAH1Q2TAA2 248 aaPredicted RBP16.11■□□□□ 0.17
MSLN-207ENST00000566549 TMEM200AQ86VY9 491 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 ZFP62Q8NB50 900 aaPredicted RBP16.11■□□□□ 0.17
MSLN-207ENST00000566549 C1orf123Q9NWV4 160 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 DOCK7Q96N67 2140 aa16.11■□□□□ 0.17
MSLN-207ENST00000566549 SIGLEC5O15389 551 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 ZNF728P0DKX0 622 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 DUSP1P28562 367 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 IGFBP7Q16270 282 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 GALNT11Q8NCW6 608 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 APOBEC3DQ96AK3 386 aaPredicted RBP16.1■□□□□ 0.17
MSLN-207ENST00000566549 MRPS24Q96EL2 167 aaKnown RBP16.1■□□□□ 0.17
MSLN-207ENST00000566549 PIK3IP1Q96FE7 263 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 ZNF552Q9H707 407 aaPredicted RBP16.1■□□□□ 0.17
MSLN-207ENST00000566549 C12orf4Q9NQ89 552 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 ATPIF1Q9UII2 106 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 NUP50Q9UKX7 468 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 PQLC2LA1A4F0 135 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 CRYM-AS1A6NIL9 109 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 A8MXK9 166 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 ZNF732B4DXR9 585 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 FGF2P09038 288 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 PRSS54Q6PEW0 395 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 ZDHHC23Q8IYP9 409 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 STPG2Q8N412 459 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 POM121L2Q96KW2 1035 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 TECTBQ96PL2 329 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 MS4A7Q9GZW8 240 aaPredicted RBP16.1■□□□□ 0.17
MSLN-207ENST00000566549 ZNF286AQ9HBT8 521 aa16.1■□□□□ 0.17
MSLN-207ENST00000566549 TRBV6-7A0A0A0MS04 114 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 LILRA1O75019 489 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 FUT3P21217 361 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 ECI1P42126 302 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 PLP2Q04941 152 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 ABCA11PQ4W5N1 156 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 SPATA46Q5T0L3 261 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 DEFB124Q8NES8 71 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 OR5T2Q8NGG2 359 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 TRGV5A0A0B4J1U4 118 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 SPAARA0A1B0GVQ0 90 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 LAMA5O15230 3695 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 IL18BPO95998 194 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 PAN3Q58A45 887 aaKnown RBP16.09■□□□□ 0.17
MSLN-207ENST00000566549 MRPL24Q96A35 216 aaKnown RBP16.09■□□□□ 0.17
MSLN-207ENST00000566549 WDYHV1Q96HA8 205 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 DHRS9Q9BPW9 319 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 OR2S2Q9NQN1 319 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 KMT2EQ8IZD2 1858 aa16.09■□□□□ 0.17
MSLN-207ENST00000566549 A0A1W2PR80 420 aa16.08■□□□□ 0.17
MSLN-207ENST00000566549 NKX2-8O15522 239 aa16.08■□□□□ 0.17
MSLN-207ENST00000566549 PLEKHN1Q494U1 663 aaPredicted RBP16.08■□□□□ 0.17
MSLN-207ENST00000566549 IGSF11Q5DX21 431 aa16.08■□□□□ 0.17
MSLN-207ENST00000566549 DHRS11Q6UWP2 260 aa16.08■□□□□ 0.17
MSLN-207ENST00000566549 OR5L1Q8NGL2 311 aa16.08■□□□□ 0.17
MSLN-207ENST00000566549 OR11L1Q8NGX0 322 aa16.08■□□□□ 0.17
MSLN-207ENST00000566549 RTN4IP1Q8WWV3 396 aaPredicted RBP16.08■□□□□ 0.17
MSLN-207ENST00000566549 ZNF488Q96MN9 340 aa16.08■□□□□ 0.17
MSLN-207ENST00000566549 BARX1Q9HBU1 254 aaPredicted RBP16.08■□□□□ 0.17
MSLN-207ENST00000566549 PCDHB16Q9NRJ7 776 aa16.08■□□□□ 0.17
MSLN-207ENST00000566549 TAS2R3Q9NYW6 316 aa16.08■□□□□ 0.17
MSLN-207ENST00000566549 SLC22A20A6NK97 555 aa16.08■□□□□ 0.16
MSLN-207ENST00000566549 SCGB1D2O95969 90 aa16.08■□□□□ 0.16
MSLN-207ENST00000566549 ACTL6AO96019 429 aa16.08■□□□□ 0.16
MSLN-207ENST00000566549 OR5AC1P0C628 307 aa16.08■□□□□ 0.16
MSLN-207ENST00000566549 ARR3P36575 388 aa16.08■□□□□ 0.16
MSLN-207ENST00000566549 WNT5AP41221 380 aa16.08■□□□□ 0.16
MSLN-207ENST00000566549 NSUN5P2Q63ZY6 315 aa16.08■□□□□ 0.16
MSLN-207ENST00000566549 EXTL1Q92935 676 aa16.08■□□□□ 0.16
MSLN-207ENST00000566549 SYNGR1O43759 233 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 APLNRP35414 380 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 CEACAM21Q3KPI0 293 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 GGNBP1Q5YKI7 109 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 ZNF585AQ6P3V2 769 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 HSD17B13Q7Z5P4 300 aaPredicted RBP16.07■□□□□ 0.16
MSLN-207ENST00000566549 PHYHIPLQ96FC7 376 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 FAM117AQ9C073 453 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 CYTL1Q9NRR1 136 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 DECR2Q9NUI1 292 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 MTCH1Q9NZJ7 389 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 CD300LBA8K4G0 201 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 IL32P24001 234 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 CCL11P51671 97 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 CLN3Q13286 438 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 GCNT2Q8N0V5 402 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 TMED6Q8WW62 240 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 RNF122Q9H9V4 155 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 ZC4H2Q9NQZ6 224 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 ASF1BQ9NVP2 202 aa16.07■□□□□ 0.16
MSLN-207ENST00000566549 COX5BP10606 129 aa16.06■□□□□ 0.16
MSLN-207ENST00000566549 TPT1P13693 172 aaKnown RBP16.06■□□□□ 0.16
MSLN-207ENST00000566549 HAGHLQ6PII5 290 aaPredicted RBP16.06■□□□□ 0.16
MSLN-207ENST00000566549 MDP1Q86V88 176 aa16.06■□□□□ 0.16
MSLN-207ENST00000566549 NAA60Q9H7X0 242 aa16.06■□□□□ 0.16
MSLN-207ENST00000566549 SLC2A9Q9NRM0 540 aa16.06■□□□□ 0.16
MSLN-207ENST00000566549 MEMO1Q9Y316 297 aa16.06■□□□□ 0.16
MSLN-207ENST00000566549 LSM5Q9Y4Y9 91 aaKnown RBP16.06■□□□□ 0.16
MSLN-207ENST00000566549 DMXL1Q9Y485 3027 aa16.06■□□□□ 0.16
MSLN-207ENST00000566549 WISP2O76076 250 aa16.06■□□□□ 0.16
MSLN-207ENST00000566549 AADACP22760 399 aa16.06■□□□□ 0.16
MSLN-207ENST00000566549 NOVA1P51513 510 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms