RNA–Protein interactions for RNA: ENST00000566347.5

CLN6-207, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best) BASIC

Gene CLN6, Length 981 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-207ENST00000566347 HERPUD1Q15011 391 aa16.34■□□□□ 0.21
CLN6-207ENST00000566347 SPIN3Q5JUX0 258 aa16.34■□□□□ 0.21
CLN6-207ENST00000566347 ZNF626Q68DY1 528 aa16.34■□□□□ 0.21
CLN6-207ENST00000566347 LHFPL4Q7Z7J7 247 aa16.34■□□□□ 0.21
CLN6-207ENST00000566347 FAM58AQ8N1B3 248 aa16.34■□□□□ 0.21
CLN6-207ENST00000566347 ACBD7Q8N6N7 88 aa16.34■□□□□ 0.21
CLN6-207ENST00000566347 PIFOQ8TCI5 191 aa16.34■□□□□ 0.21
CLN6-207ENST00000566347 FGGYQ96C11 551 aa16.34■□□□□ 0.21
CLN6-207ENST00000566347 MALSU1Q96EH3 234 aa16.34■□□□□ 0.21
CLN6-207ENST00000566347 MBOAT4Q96T53 435 aa16.34■□□□□ 0.21
CLN6-207ENST00000566347 CDCA4Q9BXL8 241 aa16.34■□□□□ 0.21
CLN6-207ENST00000566347 RBFOX1Q9NWB1 397 aaKnown RBP16.34■□□□□ 0.21
CLN6-207ENST00000566347 HHLA2Q9UM44 414 aa16.34■□□□□ 0.21
CLN6-207ENST00000566347 LINC00312Q9Y6C7 94 aa16.34■□□□□ 0.21
CLN6-207ENST00000566347 IGKV1-9A0A0C4DH69 117 aa16.33■□□□□ 0.2
CLN6-207ENST00000566347 TSPAN15O95858 294 aa16.33■□□□□ 0.2
CLN6-207ENST00000566347 OCM2P0CE71 109 aa16.33■□□□□ 0.2
CLN6-207ENST00000566347 OCMP0CE72 109 aaPredicted RBP16.33■□□□□ 0.2
CLN6-207ENST00000566347 OR12D2P58182 307 aa16.33■□□□□ 0.2
CLN6-207ENST00000566347 ZNF146Q15072 292 aa16.33■□□□□ 0.2
CLN6-207ENST00000566347 GRK1Q15835 563 aa16.33■□□□□ 0.2
CLN6-207ENST00000566347 ZIK1Q3SY52 487 aaPredicted RBP16.33■□□□□ 0.2
CLN6-207ENST00000566347 C10orf67Q8IYJ2 551 aa16.33■□□□□ 0.2
CLN6-207ENST00000566347 OPALINQ96PE5 141 aa16.33■□□□□ 0.2
CLN6-207ENST00000566347 ABCB10Q9NRK6 738 aa16.33■□□□□ 0.2
CLN6-207ENST00000566347 EXOGQ9Y2C4 368 aaKnown RBP16.33■□□□□ 0.2
CLN6-207ENST00000566347 SIGLEC9Q9Y336 463 aa16.33■□□□□ 0.2
CLN6-207ENST00000566347 E9PQ18 207 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 H3BNX3 289 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 CHST1O43916 411 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 IGHA1P01876 353 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 CSF1P09603 554 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 PRKACAP17612 351 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 BCL3P20749 454 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 NPBWR2P48146 333 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 NANOS3P60323 173 aaKnown RBP16.32■□□□□ 0.2
CLN6-207ENST00000566347 PDZK1IP1Q13113 114 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 KPNB1Q14974 876 aaKnown RBP16.32■□□□□ 0.2
CLN6-207ENST00000566347 TCF23Q7RTU1 214 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 CBR4Q8N4T8 237 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 RPS4Y2Q8TD47 263 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 NEK6Q9HC98 313 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 IL36RNQ9UBH0 155 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 PITPNC1Q9UKF7 332 aa16.32■□□□□ 0.2
CLN6-207ENST00000566347 MEX3AA1L020 520 aaKnown RBP16.31■□□□□ 0.2
CLN6-207ENST00000566347 J3QLW9 94 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 MGST3O14880 152 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 MT-ND2P03891 347 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 RPSAP08865 295 aaKnown RBP16.31■□□□□ 0.2
CLN6-207ENST00000566347 ZNF19P17023 458 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 DYNC1I2Q13409 638 aaKnown RBP16.31■□□□□ 0.2
CLN6-207ENST00000566347 FAM189A2Q15884 450 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 SSX2Q16385 188 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 DYNAPQ8N1N2 210 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 OR52N4Q8NGI2 321 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 OR13C3Q8NGS6 347 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 FAM110DQ8TAY7 271 aaPredicted RBP16.31■□□□□ 0.2
CLN6-207ENST00000566347 PELI1Q96FA3 418 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 C4orf36Q96KX1 117 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 CHST6Q9GZX3 395 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 TCF19Q9Y242 345 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 GMPPBQ9Y5P6 360 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 SESN1Q9Y6P5 492 aa16.31■□□□□ 0.2
CLN6-207ENST00000566347 TGP01266 2768 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 MPZL2O60487 215 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 PSPNO60542 156 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 DUSP1P28562 367 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 ERP29P30040 261 aaKnown RBP16.3■□□□□ 0.2
CLN6-207ENST00000566347 DYNLT3P51808 116 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 ALKBH1Q13686 389 aaKnown RBP16.3■□□□□ 0.2
CLN6-207ENST00000566347 PLA1AQ53H76 456 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 MINOS1Q5TGZ0 78 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 ZBTB49Q6ZSB9 765 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 CCDC121Q6ZUS5 278 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 KLHDC1Q8N7A1 406 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 ZNF676Q8N7Q3 588 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 LGALS12Q96DT0 336 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 Q96MT0 163 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 NKX3-1Q99801 234 aaPredicted RBP16.3■□□□□ 0.2
CLN6-207ENST00000566347 RHOFQ9HBH0 211 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 HMG20AQ9NP66 347 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 UBE2J1Q9Y385 318 aaPredicted RBP16.3■□□□□ 0.2
CLN6-207ENST00000566347 PCDHGB5Q9Y5G0 923 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 MINOS1-NBL1R4GNA1 71 aa16.3■□□□□ 0.2
CLN6-207ENST00000566347 OR4C45A6NMZ5 311 aa16.29■□□□□ 0.2
CLN6-207ENST00000566347 SH2D1BO14796 132 aa16.29■□□□□ 0.2
CLN6-207ENST00000566347 OR3A1P47881 315 aa16.29■□□□□ 0.2
CLN6-207ENST00000566347 P2RX3P56373 397 aa16.29■□□□□ 0.2
CLN6-207ENST00000566347 GALEQ14376 348 aa16.29■□□□□ 0.2
CLN6-207ENST00000566347 SYS1Q8N2H4 156 aa16.29■□□□□ 0.2
CLN6-207ENST00000566347 TPRX1Q8N7U7 411 aa16.29■□□□□ 0.2
CLN6-207ENST00000566347 OR4S1Q8NGB4 309 aa16.29■□□□□ 0.2
CLN6-207ENST00000566347 OR51A4Q8NGJ6 313 aa16.29■□□□□ 0.2
CLN6-207ENST00000566347 CFHR4Q92496 578 aa16.29■□□□□ 0.2
CLN6-207ENST00000566347 C9orf16Q9BUW7 83 aa16.29■□□□□ 0.2
CLN6-207ENST00000566347 ALG8Q9BVK2 526 aa16.29■□□□□ 0.2
CLN6-207ENST00000566347 EXOSC4Q9NPD3 245 aaKnown RBP16.29■□□□□ 0.2
CLN6-207ENST00000566347 FOXJ3Q9UPW0 622 aa16.29■□□□□ 0.2
CLN6-207ENST00000566347 IGHV2-26A0A0B4J1V2 119 aa16.28■□□□□ 0.2
CLN6-207ENST00000566347 FUOMA2VDF0 154 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms