RNA–Protein interactions for RNA: ENST00000566296.1

TSR3-202, Transcript of TSR3, acp transferase ribosome maturation factor, humanhuman

TSL 3

Gene TSR3, Length 649 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSR3-202ENST00000566296 CCL3L1P16619 93 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 MYL12AP19105 171 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 PRDX2P32119 198 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 HAAOP46952 286 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 RIDAP52758 137 aaKnown RBP13.39□□□□□ -0.27
TSR3-202ENST00000566296 SLC35A2P78381 396 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 PLA1AQ53H76 456 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 TMEM200BQ69YZ2 307 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 ZNF782Q6ZMW2 699 aaPredicted RBP13.39□□□□□ -0.27
TSR3-202ENST00000566296 PLEKHG7Q6ZR37 379 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 ZNF573Q86YE8 665 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 EGFL6Q8IUX8 553 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 ZNF679Q8IYX0 411 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 STX19Q8N4C7 294 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 OR4M1Q8NGD0 313 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 ZNF488Q96MN9 340 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 OR8B4Q96RC9 309 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 DUSP21Q9H596 190 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 CHCHD3Q9NX63 227 aaKnown RBP13.39□□□□□ -0.27
TSR3-202ENST00000566296 NUFIP1Q9UHK0 495 aaKnown RBP13.39□□□□□ -0.27
TSR3-202ENST00000566296 IKZF2Q9UKS7 526 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 ZNF281Q9Y2X9 895 aa13.39□□□□□ -0.27
TSR3-202ENST00000566296 EXOSC1Q9Y3B2 195 aaKnown RBP13.39□□□□□ -0.27
TSR3-202ENST00000566296 PTGES3LE9PB15 166 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 PEX14O75381 377 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 ALX3O95076 343 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 KRT8P05787 483 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 CDK1P06493 297 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 CEBPDP49716 269 aaPredicted RBP13.38□□□□□ -0.27
TSR3-202ENST00000566296 GABARAPL2P60520 117 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 ACTA2P62736 377 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 ACTG2P63267 376 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 ZNF85Q03923 595 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 EMX1Q04741 257 aaPredicted RBP13.38□□□□□ -0.27
TSR3-202ENST00000566296 GALEQ14376 348 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 ZNF273Q14593 569 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 Q6ZPA2 131 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 KCTD20Q7Z5Y7 419 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 LYG1Q8N1E2 194 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 OR4F17Q8NGA8 305 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 MRAPQ8TCY5 172 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 RPS4Y2Q8TD47 263 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 OR4F4Q96R69 305 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 CDCA4Q9BXL8 241 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 MOB1AQ9H8S9 216 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 ZNF702PQ9H963 129 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 ERVK13-1Q9NX77 482 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 OR14J1Q9UGF5 321 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 GTF2A1LQ9UNN4 478 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 TCF19Q9Y242 345 aa13.38□□□□□ -0.27
TSR3-202ENST00000566296 TBL2Q9Y4P3 447 aaKnown RBP13.38□□□□□ -0.27
TSR3-202ENST00000566296 VGLL3A8MV65 326 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 SYNGR1O43759 233 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 SULT1C4O75897 302 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 IGLV3-1P01715 115 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 ARG1P05089 322 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 CNN3Q15417 329 aaKnown RBP13.37□□□□□ -0.27
TSR3-202ENST00000566296 ARSJQ5FYB0 599 aaPredicted RBP13.37□□□□□ -0.27
TSR3-202ENST00000566296 CLVS2Q5SYC1 327 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 SSX6Q7RTT6 188 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 FAM220AQ7Z4H9 259 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 LHFPL4Q7Z7J7 247 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 LHFPL3Q86UP9 236 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 NDUFA11Q86Y39 141 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 CALHM1Q8IU99 346 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 C11orf42Q8N5U0 333 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 OR13D1Q8NGV5 346 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 R3HDM4Q96D70 268 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 ALG8Q9BVK2 526 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 TTTY10Q9BZA0 68 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 GPR173Q9NS66 373 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 PITPNC1Q9UKF7 332 aa13.37□□□□□ -0.27
TSR3-202ENST00000566296 METTL15A6NJ78 407 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 PRR32B1ATL7 298 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 LOC110117498-PIK3R3F6TDL0 507 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 RGS10O43665 173 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 MRPS14O60783 128 aaKnown RBP13.36□□□□□ -0.27
TSR3-202ENST00000566296 NOS1APO75052 506 aaPredicted RBP13.36□□□□□ -0.27
TSR3-202ENST00000566296 TK1P04183 234 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 ALDOBP05062 364 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 LIMS3P0CW19 117 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 LIMS4P0CW20 117 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 MFGE8Q08431 387 aaPredicted RBP13.36□□□□□ -0.27
TSR3-202ENST00000566296 RNLSQ5VYX0 342 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 Q8N2B8 174 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 SYS1Q8N2H4 156 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 ASCC1Q8N9N2 400 aaKnown RBP13.36□□□□□ -0.27
TSR3-202ENST00000566296 PIFOQ8TCI5 191 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 NRIP2Q9BQI9 281 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 ZNF649Q9BS31 505 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 PRSS22Q9GZN4 317 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 NECAP2Q9NVZ3 263 aa13.36□□□□□ -0.27
TSR3-202ENST00000566296 PAK1IP1Q9NWT1 392 aaPredicted RBP13.36□□□□□ -0.27
TSR3-202ENST00000566296 MRM2Q9UI43 246 aaKnown RBP13.36□□□□□ -0.27
TSR3-202ENST00000566296 FAM90A8PA6NJQ4 464 aa13.35□□□□□ -0.27
TSR3-202ENST00000566296 TTRP02766 147 aa13.35□□□□□ -0.27
TSR3-202ENST00000566296 CD28P10747 220 aa13.35□□□□□ -0.27
TSR3-202ENST00000566296 C21orf33P30042 268 aaPredicted RBP13.35□□□□□ -0.27
TSR3-202ENST00000566296 HABP2Q14520 560 aaPredicted RBP13.35□□□□□ -0.27
TSR3-202ENST00000566296 KCTD21Q4G0X4 260 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms