RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 TRAV40A0A0B4J280 105 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 A0A1W2PPK0 400 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 GABRPO00591 440 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 MRPS14O60783 128 aaKnown RBP11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 RGS9O75916 674 aaPredicted RBP11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 KDM4BO94953 1096 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 HSMCR30P0CW71 290 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 IGHV4-38-2P0DP08 117 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 MMP9P14780 707 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 NDUFB7P17568 137 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 BDKRB2P30411 391 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 TGFBR2P37173 567 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 BPIFB3P59826 476 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 HILS1P60008 231 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 MLLT11Q13015 90 aaPredicted RBP11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 INSL4Q14641 139 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 ACSM3Q53FZ2 586 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 LIPKQ5VXJ0 399 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 SATL1Q86VE3 508 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 FAM58AQ8N1B3 248 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 ZNF561Q8N587 486 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 MS4A15Q8N5U1 240 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 ZSCAN4Q8NAM6 433 aaPredicted RBP11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 SPATA3Q8NHX4 192 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 C8orf46Q8TAG6 207 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 H1FXQ92522 213 aaKnown RBP11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 UFD1Q92890 307 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 EMG1Q92979 244 aaKnown RBP11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 MGLLQ99685 303 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 NKX3-1Q99801 234 aaPredicted RBP11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 TMED9Q9BVK6 235 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 NOX4Q9NPH5 578 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 ACOT13Q9NPJ3 140 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 IL36RNQ9UBH0 155 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 KPTNQ9Y664 436 aa11.41□□□□□ -0.58
HERPUD1-210ENST00000565966 MAGEA13PA6NCF6 341 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 SFTPBP07988 381 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 TMEM225BP0DP42 221 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 CALCBP10092 127 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 CPEP16870 476 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 MAPK3P27361 379 aaPredicted RBP11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 GP2P55259 537 aaKnown RBP11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 EMX1Q04741 257 aaPredicted RBP11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 PDCD1Q15116 288 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 TUSC1Q2TAM9 212 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 KIAA2026Q5HYC2 2103 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 DDI2Q5TDH0 399 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 GPR157Q5UAW9 335 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 RBMS3Q6XE24 437 aaKnown RBP11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 C9orf139Q6ZV77 190 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 ZNF367Q7RTV3 350 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 PHC2Q8IXK0 858 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 BCL6BQ8N143 479 aaPredicted RBP11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 TMEM185AQ8NFB2 350 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 ZFAND2BQ8WV99 257 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 THRSPQ92748 146 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 CPNE2Q96FN4 548 aaPredicted RBP11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 TBX15Q96SF7 602 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 GPER1Q99527 375 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 SIRPDQ9H106 197 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 SEBOXQ9HB31 216 aaPredicted RBP11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 ELL3Q9HB65 397 aaPredicted RBP11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 RHOFQ9HBH0 211 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 HMG20AQ9NP66 347 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 CKLFQ9UBR5 152 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 FOXJ3Q9UPW0 622 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 LRRC42Q9Y546 428 aa11.4□□□□□ -0.58
HERPUD1-210ENST00000565966 IGHV3OR16-10A0A075B7F0 116 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 TRIM77I1YAP6 450 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 SC5DO75845 299 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 CHRM2P08172 466 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 PRKACAP17612 351 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 ZNF93P35789 620 aaPredicted RBP11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 OR3A4PP47883 348 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 CAPZA1P52907 286 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 COL10A1Q03692 680 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 ZNF146Q15072 292 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 FAM27D1Q5T7N8 215 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 ASCL4Q6XD76 172 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 CMTM4Q8IZR5 234 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 SPARTQ8N0X7 666 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 SVOPQ8N4V2 548 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 PXT1Q8NFP0 134 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 TNFAIP8L1Q8WVP5 186 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 C19orf24Q9BVV8 132 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 ONECUT1Q9UBC0 465 aa11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 SF3B6Q9Y3B4 125 aaKnown RBP11.39□□□□□ -0.59
HERPUD1-210ENST00000565966 TRBV23-1A0A0A0MS06 115 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 CENPVL3A0A0U1RRI6 287 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 A0A1W2PQ09 198 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 ZNF737O75373 536 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 HAND1O96004 215 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 MAS1P04201 325 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 DUSP1P28562 367 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 PTGFRP43088 359 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 SNU13P55769 128 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 RPS25P62851 125 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 SPIN3Q5JUX0 258 aa11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 FIP1L1Q6UN15 594 aaKnown RBP11.38□□□□□ -0.59
HERPUD1-210ENST00000565966 C1orf122Q6ZSJ8 110 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms