RNA–Protein interactions for RNA: ENST00000565173.1

CAPN3-213, Transcript of calpain 3, humanhuman

TSL 4

Gene CAPN3, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-213ENST00000565173 KIR3DL2P43630 455 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 NPBWR2P48146 333 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 ISL1P61371 349 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 CD83Q01151 205 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 DYNC1I2Q13409 638 aaKnown RBP6.88□□□□□ -1.31
CAPN3-213ENST00000565173 ZNF146Q15072 292 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 ATP6AP1Q15904 470 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 TMEM95Q3KNT9 176 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 TCTEX1D4Q5JR98 221 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 MINOS1Q5TGZ0 78 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 BAIAP2L2Q6UXY1 529 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 SLC25A26Q70HW3 274 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 EGFL6Q8IUX8 553 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 GID4Q8IVV7 300 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 C10orf67Q8IYJ2 551 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 RDH10Q8IZV5 341 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 YIPF7Q8N8F6 280 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 OR4S1Q8NGB4 309 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 PYDC1Q8WXC3 89 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 R3HDM4Q96D70 268 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 OR5M11Q96RB7 305 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 TBX5Q99593 518 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 PRRG3Q9BZD7 231 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 CHST5Q9GZS9 411 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 TMEM133Q9H2Q1 129 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 ABCB10Q9NRK6 738 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 NECAP2Q9NVZ3 263 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 AURKAIP1Q9NWT8 199 aaPredicted RBP6.88□□□□□ -1.31
CAPN3-213ENST00000565173 WARS2Q9UGM6 360 aaKnown RBP6.88□□□□□ -1.31
CAPN3-213ENST00000565173 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP6.88□□□□□ -1.31
CAPN3-213ENST00000565173 HILPDAQ9Y5L2 63 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 LINC00312Q9Y6C7 94 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 SESN1Q9Y6P5 492 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 MINOS1-NBL1R4GNA1 71 aa6.88□□□□□ -1.31
CAPN3-213ENST00000565173 PIN1P1O15428 100 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 HAND1O96004 215 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 AMY1AP04745 511 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 AMY2AP04746 511 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 KRT8P05787 483 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 FCGR1AP12314 374 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 BCL3P20749 454 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 PEX2P28328 305 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 ERP29P30040 261 aaKnown RBP6.87□□□□□ -1.31
CAPN3-213ENST00000565173 OR3A1P47881 315 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 RBP2P50120 134 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 OR12D2P58182 307 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 LOXL3P58215 753 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 ZNF91Q05481 1191 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 EDDM3AQ14507 147 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 GRK1Q15835 563 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 ZFP1Q6P2D0 407 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 AMIGO2Q86SJ2 522 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 FAM58AQ8N1B3 248 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 ZNF676Q8N7Q3 588 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 CCDC54Q8NEL0 328 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 DNAAF1Q8NEP3 725 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 OR4F17Q8NGA8 305 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 OR4P4Q8NGL7 312 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 MRAPQ8TCY5 172 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 SGCDQ92629 289 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 EMG1Q92979 244 aaKnown RBP6.87□□□□□ -1.31
CAPN3-213ENST00000565173 EME1Q96AY2 570 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 PHF21AQ96BD5 680 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 C10orf35Q96D05 121 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 ADAT3Q96EY9 351 aaPredicted RBP6.87□□□□□ -1.31
CAPN3-213ENST00000565173 OR4F4Q96R69 305 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 CLEC7AQ9BXN2 247 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 CHST6Q9GZX3 395 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 GABARAPL1Q9H0R8 117 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 PLEKHA1Q9HB21 404 aa6.87□□□□□ -1.31
CAPN3-213ENST00000565173 RBFOX1Q9NWB1 397 aaKnown RBP6.87□□□□□ -1.31
CAPN3-213ENST00000565173 IGKV1-12A0A0C4DH73 117 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 TRBV2A0A0J9YWF9 115 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 LOC107986453A0A1B0GWG9 222 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 J3QRE1 110 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 F2RL2O00254 374 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 MGST3O14880 152 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 ENTPD6O75354 484 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 GATBO75879 557 aaKnown RBP6.86□□□□□ -1.31
CAPN3-213ENST00000565173 SERPINA3P01011 423 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 IGKV1D-12P01611 117 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 IGLV1-47P01700 117 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 ISG15P05161 165 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 CALCBP10092 127 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 GABRR1P24046 479 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 CD24P25063 80 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 AZGP1P25311 298 aaKnown RBP6.86□□□□□ -1.31
CAPN3-213ENST00000565173 LMO1P25800 156 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 VDAC2P45880 294 aaPredicted RBP6.86□□□□□ -1.31
CAPN3-213ENST00000565173 MTCP1P56278 107 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 ZNF85Q03923 595 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 SLC34A1Q06495 639 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 FOXB2Q5VYV0 432 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 RNF144BQ7Z419 303 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 ZDHHC13Q8IUH4 622 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 Q8IYB0 196 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 ENTHD1Q8IYW4 607 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 ABHD12Q8N2K0 398 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 OR10H4Q8NGA5 316 aa6.86□□□□□ -1.31
CAPN3-213ENST00000565173 OR5AU1Q8NGC0 362 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms