RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 CBX3Q13185 183 aa16.64■□□□□ 0.25
CLN6-205ENST00000564846 IL13RA2Q14627 380 aa16.64■□□□□ 0.25
CLN6-205ENST00000564846 ATAD3CQ5T2N8 411 aa16.64■□□□□ 0.25
CLN6-205ENST00000564846 Q6ZR03 302 aa16.64■□□□□ 0.25
CLN6-205ENST00000564846 OR5H2Q8NGV7 314 aa16.64■□□□□ 0.25
CLN6-205ENST00000564846 HS3ST6Q96QI5 342 aa16.64■□□□□ 0.25
CLN6-205ENST00000564846 MED28Q9H204 178 aa16.64■□□□□ 0.25
CLN6-205ENST00000564846 SPACA1Q9HBV2 294 aa16.64■□□□□ 0.25
CLN6-205ENST00000564846 ZNF701Q9NV72 531 aaPredicted RBP16.64■□□□□ 0.25
CLN6-205ENST00000564846 RCC2Q9P258 522 aaKnown RBP16.64■□□□□ 0.25
CLN6-205ENST00000564846 ZNF230Q9UIE0 474 aaPredicted RBP16.64■□□□□ 0.25
CLN6-205ENST00000564846 DUSP13Q9UII6 198 aa16.64■□□□□ 0.25
CLN6-205ENST00000564846 ZNF221Q9UK13 617 aa16.64■□□□□ 0.25
CLN6-205ENST00000564846 CDIPTO14735 213 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 RLN1P04808 185 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 GRPP07492 148 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 CHRNB4P30926 498 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 KLF3P57682 345 aaPredicted RBP16.63■□□□□ 0.25
CLN6-205ENST00000564846 PDCD1Q15116 288 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 IGFBP7Q16270 282 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 ST3GAL2Q16842 350 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 GLDNQ6ZMI3 551 aaPredicted RBP16.63■□□□□ 0.25
CLN6-205ENST00000564846 WFDC8Q8IUA0 241 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 NUP37Q8NFH4 326 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 OR13C8Q8NGS7 320 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 TMEM171Q8WVE6 324 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 DACT3Q96B18 629 aaPredicted RBP16.63■□□□□ 0.25
CLN6-205ENST00000564846 ST6GAL2Q96JF0 529 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 ZNF488Q96MN9 340 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 BEX2Q9BXY8 128 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 ZNF442Q9H7R0 627 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 BEX1Q9HBH7 125 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 PRR14LQ5THK1 2151 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 ZZEF1O43149 2961 aa16.63■□□□□ 0.25
CLN6-205ENST00000564846 THBDP07204 575 aa16.62■□□□□ 0.25
CLN6-205ENST00000564846 PGA5P0DJD9 388 aa16.62■□□□□ 0.25
CLN6-205ENST00000564846 ANXA7P20073 488 aaKnown RBP16.62■□□□□ 0.25
CLN6-205ENST00000564846 OR3A3P47888 321 aa16.62■□□□□ 0.25
CLN6-205ENST00000564846 ERVK11-1P61568 191 aa16.62■□□□□ 0.25
CLN6-205ENST00000564846 CD276Q5ZPR3 534 aa16.62■□□□□ 0.25
CLN6-205ENST00000564846 OR5AP2Q8NGF4 316 aa16.62■□□□□ 0.25
CLN6-205ENST00000564846 NRIP2Q9BQI9 281 aa16.62■□□□□ 0.25
CLN6-205ENST00000564846 HDHD3Q9BSH5 251 aaPredicted RBP16.62■□□□□ 0.25
CLN6-205ENST00000564846 ALX4Q9H161 411 aaPredicted RBP16.62■□□□□ 0.25
CLN6-205ENST00000564846 TLNRD1Q9H1K6 362 aa16.62■□□□□ 0.25
CLN6-205ENST00000564846 MSL2Q9HCI7 577 aa16.62■□□□□ 0.25
CLN6-205ENST00000564846 GPN1Q9HCN4 374 aaPredicted RBP16.62■□□□□ 0.25
CLN6-205ENST00000564846 C12orf4Q9NQ89 552 aa16.62■□□□□ 0.25
CLN6-205ENST00000564846 IGLV3-9A0A075B6K5 115 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 F5H5P2 479 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 SELENOVP59797 346 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 MAB21L1Q13394 359 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 IKZF1Q13422 519 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 MSMPQ1L6U9 139 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 CHRFAM7AQ494W8 412 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 BRICD5Q6PL45 260 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 NGBQ9NPG2 151 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 COQ3Q9NZJ6 369 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 IL36RNQ9UBH0 155 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 TMEM82A0PJX8 343 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 UBE2QL1A1L167 161 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 SNRPGP15A8MWD9 76 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 NOS1APO75052 506 aaPredicted RBP16.61■□□□□ 0.25
CLN6-205ENST00000564846 FCGR3AP08637 254 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 EIF2B2P49770 351 aaKnown RBP16.61■□□□□ 0.25
CLN6-205ENST00000564846 FBXL19-AS1Q494R0 122 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 PCSK4Q6UW60 755 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 LRP11Q86VZ4 500 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 TMEM17Q86X19 198 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 CCDC107Q8WV48 283 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 IFT22Q9H7X7 185 aa16.61■□□□□ 0.25
CLN6-205ENST00000564846 HPXP02790 462 aa16.6■□□□□ 0.25
CLN6-205ENST00000564846 GLAP06280 429 aa16.6■□□□□ 0.25
CLN6-205ENST00000564846 VHLLQ6RSH7 139 aa16.6■□□□□ 0.25
CLN6-205ENST00000564846 SLC36A1Q7Z2H8 476 aa16.6■□□□□ 0.25
CLN6-205ENST00000564846 PIAS4Q8N2W9 510 aaPredicted RBP16.6■□□□□ 0.25
CLN6-205ENST00000564846 ZDHHC22Q8N966 263 aa16.6■□□□□ 0.25
CLN6-205ENST00000564846 POC1AQ8NBT0 407 aa16.6■□□□□ 0.25
CLN6-205ENST00000564846 MAFIPQ8WZ33 124 aa16.6■□□□□ 0.25
CLN6-205ENST00000564846 ING3Q9NXR8 418 aa16.6■□□□□ 0.25
CLN6-205ENST00000564846 SHANK1Q9Y566 2161 aa16.6■□□□□ 0.25
CLN6-205ENST00000564846 POLEQ07864 2286 aa16.6■□□□□ 0.25
CLN6-205ENST00000564846 PLSCR5A0PG75 271 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 DPRXA6NFQ7 191 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 MCRIP1C9JLW8 97 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 CREBL2O60519 120 aaPredicted RBP16.59■□□□□ 0.25
CLN6-205ENST00000564846 TSPAN5P62079 268 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 CD83Q01151 205 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 OVCH2Q7RTZ1 564 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 C11orf53Q8IXP5 236 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 TERB2Q8NHR7 220 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 SYT3Q9BQG1 590 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 PPA2Q9H2U2 334 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 RANGRFQ9HD47 186 aaPredicted RBP16.59■□□□□ 0.25
CLN6-205ENST00000564846 MYOZ1Q9NP98 299 aaPredicted RBP16.59■□□□□ 0.25
CLN6-205ENST00000564846 ANXA10Q9UJ72 324 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 HEATR1Q9H583 2144 aaKnown RBP16.59■□□□□ 0.25
CLN6-205ENST00000564846 A8MV72 311 aaPredicted RBP16.59■□□□□ 0.25
CLN6-205ENST00000564846 ABCD4O14678 606 aa16.59■□□□□ 0.25
CLN6-205ENST00000564846 SSNA1O43805 119 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms