RNA–Protein interactions for RNA: ENST00000564593.1

LINC00560-201, long intergenic non-protein coding RNA 560, humanhuman

TSL 1 (best) BASIC

Gene LINC00560, Length 1,599 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00560-201ENST00000564593 BPY2O14599 106 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 REM1O75628 298 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 SERPINE1P05121 402 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 SERPINA6P08185 405 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 RPL22P35268 128 aaKnown RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 RAB11AP62491 216 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 STX3Q13277 289 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 RAB11BQ15907 218 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 ABCA11PQ4W5N1 156 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 GCSAMLQ5JQS6 135 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 SAXO2Q658L1 398 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 ADNP2Q6IQ32 1131 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 ZFP1Q6P2D0 407 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 H1FOOQ8IZA3 346 aaPredicted RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 ST13P4Q8IZP2 240 aaPredicted RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 TMEM86AQ8N2M4 240 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 ARRDC1Q8N5I2 433 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 LRRC75AQ8NAA5 344 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 INO80EQ8NBZ0 244 aaPredicted RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 FAM172AQ8WUF8 416 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 DCAKDQ8WVC6 231 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 RXFP2Q8WXD0 754 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 APH1AQ96BI3 265 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 NEURL3Q96EH8 262 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 ZNF488Q96MN9 340 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 EBNA1BP2Q99848 306 aaKnown RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 UQCC2Q9BRT2 126 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 SLIRPQ9GZT3 109 aaKnown RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 IL22Q9GZX6 179 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 CHRAC1Q9NRG0 131 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 MCUBQ9NWR8 336 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 SLC17A7Q9P2U7 560 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 STX18Q9P2W9 335 aaKnown RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 HEY1Q9Y5J3 304 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 PTPRDP23468 1912 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 ANKRD36A6QL64 1941 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 SMIM26A0A096LP01 95 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 IGKV1-8A0A0C4DH67 115 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 FAM159BA6NKW6 160 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 TRPC5OSA6NMA1 111 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 PDZK1P1A8MUH7 402 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 ZNF879B4DU55 563 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 PFDN6O15212 129 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 SIVA1O15304 175 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 XRCC2O43543 280 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 ZNF207O43670 478 aaKnown RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 SLC22A5O76082 557 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 CSTAP01040 98 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 HLA-DQA1P01909 254 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 OR8U9P0C7N5 309 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 PGA4P0DJD7 388 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 PGA3P0DJD8 388 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 PGA5P0DJD9 388 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 CD37P11049 281 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 MUC1P15941 1255 aaPredicted RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 PRKACBP22694 351 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 NPY1RP25929 384 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 MAGEA3P43357 314 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 KIR3DL2P43630 455 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 GPR1P46091 355 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 FABP6P51161 128 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 RAP1GDS1P52306 607 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 TPI1P60174 286 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 RPL23P62829 140 aaKnown RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 DYNC1I2Q13409 638 aaKnown RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 HIKESHIQ53FT3 197 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 MPV17L2Q567V2 206 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 STEAP4Q687X5 459 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 PDPK2PQ6A1A2 396 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 FAM183BPQ6ZVS7 135 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 USP50Q70EL3 339 aaPredicted RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 FAM122BQ7Z309 247 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 SPATA24Q86W54 205 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 OR6N1Q8NGY5 312 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 RAB1CQ92928 201 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 POP5Q969H6 163 aaKnown RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 BTN2A3PQ96KV6 586 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 TSC22D3Q99576 134 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 GPR21Q99679 349 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 SNRNP25Q9BV90 132 aaKnown RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 DHX35Q9H5Z1 703 aaKnown RBP2.78□□□□□ -1.96
LINC00560-201ENST00000564593 VCX3AQ9NNX9 186 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 C8orf4Q9NR00 106 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 SIRT7Q9NRC8 400 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 OPN4Q9UHM6 478 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 RFNGQ9Y644 331 aa2.78□□□□□ -1.96
LINC00560-201ENST00000564593 ZNF638Q14966 1978 aaKnown RBP2.78□□□□□ -1.97
LINC00560-201ENST00000564593 GBF1Q92538 1859 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 TRPM7Q96QT4 1865 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 DOCK4Q8N1I0 1966 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 SCN8AQ9UQD0 1980 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 IGHV1-69DA0A0B4J2H0 117 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 PSMG1O95456 288 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 BPGMP07738 259 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 RPSAP08865 295 aaKnown RBP2.77□□□□□ -1.97
LINC00560-201ENST00000564593 THRAP10827 490 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 KCNE1P15382 129 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 PRKACAP17612 351 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 SRMP19623 302 aa2.77□□□□□ -1.97
LINC00560-201ENST00000564593 CD82P27701 267 aa2.77□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms