RNA–Protein interactions for RNA: ENST00000564255.5

CHD9-209, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5

Gene CHD9, Length 2,896 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-209ENST00000564255 MRPL52Q86TS9 123 aaKnown RBP1.57□□□□□ -2.16
CHD9-209ENST00000564255 LRRC6Q86X45 466 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 ZNF738Q8NE65 137 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 OR5T1Q8NG75 326 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 OR7G1Q8NGA0 311 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 OR4M2Q8NGB6 313 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 PHF10Q8WUB8 498 aaKnown RBP1.57□□□□□ -2.16
CHD9-209ENST00000564255 TNFRSF14Q92956 283 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 BIRC8Q96P09 236 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 MED10Q9BTT4 135 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 VCXQ9H320 206 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 SIRT7Q9NRC8 400 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 RBM22Q9NW64 420 aaKnown RBP eCLIP1.57□□□□□ -2.166e-6■■■□□ 18.6
CHD9-209ENST00000564255 OPN4Q9UHM6 478 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 PRO0628Q9UI54 55 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 TDRD6O60522 2096 aaKnown RBP1.57□□□□□ -2.16
CHD9-209ENST00000564255 VWA8A3KMH1 1905 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 IGKV1-6A0A0C4DH72 117 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 OR2AT4A6NND4 320 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 BET1O15155 118 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 ENSAO43768 121 aaKnown RBP1.57□□□□□ -2.16
CHD9-209ENST00000564255 MUC1P15941 1255 aaPredicted RBP1.57□□□□□ -2.16
CHD9-209ENST00000564255 CRATP43155 626 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 GRB2P62993 217 aaKnown RBP1.57□□□□□ -2.16
CHD9-209ENST00000564255 PMVKQ15126 192 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 CLLU1OSQ5K130 101 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 AHSA2Q719I0 299 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 OR5M1Q8NGP8 315 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 QKIQ96PU8 341 aaKnown RBP eCLIP1.57□□□□□ -2.168e-8■■■■■ 29.1
CHD9-209ENST00000564255 OR2M4Q96R27 311 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 IFT46Q9NQC8 304 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 FKBP14Q9NWM8 211 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 ENOPH1Q9UHY7 261 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 KLK12Q9UKR0 248 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 USH1CQ9Y6N9 552 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 URGCP-MRPS24S4R325 110 aa1.57□□□□□ -2.16
CHD9-209ENST00000564255 DENND4BO75064 1496 aaPredicted RBP1.56□□□□□ -2.16
CHD9-209ENST00000564255 TCOF1Q13428 1488 aaKnown RBP1.56□□□□□ -2.16
CHD9-209ENST00000564255 LRRC9Q6ZRR7 1453 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 SHANK2Q9UPX8 1470 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 TMEM72A0PK05 275 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 CENPBD1B2RD01 187 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 CALUO43852 315 aaPredicted RBP1.56□□□□□ -2.16
CHD9-209ENST00000564255 MYO1DO94832 1006 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 HLA-DQB1P01920 261 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 OR4Q2P0C623 313 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 ZNF806P0C7X5 589 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 IL1RNP18510 177 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 GTF2H1P32780 548 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 ARPC4P59998 168 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 PFN3P60673 137 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 RPL10AP62906 217 aaKnown RBP1.56□□□□□ -2.16
CHD9-209ENST00000564255 ZNF816Q0VGE8 651 aaPredicted RBP1.56□□□□□ -2.16
CHD9-209ENST00000564255 MAPRE2Q15555 327 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 CEACAM21Q3KPI0 293 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 TPGS1Q6ZTW0 290 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 LRRC34Q8IZ02 419 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 SLC35G3Q8N808 338 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 OR8G5Q8NG78 346 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 PHOSPHO2Q8TCD6 241 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 CPNE4Q96A23 557 aaPredicted RBP1.56□□□□□ -2.16
CHD9-209ENST00000564255 TBL1YQ9BQ87 522 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 HDHD2Q9H0R4 259 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 CA10Q9NS85 328 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 DNAJC27Q9NZQ0 273 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 HMGXB4Q9UGU5 601 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 SLC22A14Q9Y267 594 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 ENPP4Q9Y6X5 453 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 CDK13Q14004 1512 aaKnown RBP1.56□□□□□ -2.16
CHD9-209ENST00000564255 RAPGEF2Q9Y4G8 1499 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 FGD6Q6ZV73 1430 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 AGLP35573 1532 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 IGHV1-3A0A0C4DH29 117 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 M0QXV9 152 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 CRXO43186 299 aaPredicted RBP1.56□□□□□ -2.16
CHD9-209ENST00000564255 RBBP9O75884 186 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 ZNF35P13682 527 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 TAC1P20366 129 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 RPA3P35244 121 aaPredicted RBP1.56□□□□□ -2.16
CHD9-209ENST00000564255 UGT2B10P36537 528 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 TTPAP49638 278 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 ELF3P78545 371 aaPredicted RBP1.56□□□□□ -2.16
CHD9-209ENST00000564255 CDC20Q12834 499 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 SHHQ15465 462 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 SNCBQ16143 134 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 RGS21Q2M5E4 152 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 Q499Y3 187 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 KCTD16Q68DU8 428 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 MORN3Q6PF18 240 aaPredicted RBP1.56□□□□□ -2.16
CHD9-209ENST00000564255 UGT2A3Q6UWM9 527 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 ZNF695Q8IW36 515 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 ORMDL3Q8N138 153 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 ORAOV1Q8WV07 137 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 FRZBQ92765 325 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 L3HYPDHQ96EM0 354 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 CHMP6Q96FZ7 201 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 SMIM8Q96KF7 97 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 C9orf16Q9BUW7 83 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 KRTAP4-3Q9BYR4 195 aa1.56□□□□□ -2.16
CHD9-209ENST00000564255 ABCB9Q9NP78 766 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms