RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 WDR55Q9H6Y2 383 aaPredicted RBP1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 METTL17Q9H7H0 456 aaPredicted RBP1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 SND1-IT1Q9HBX3 110 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 RAB22AQ9UL26 194 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF835Q9Y2P0 537 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 SMARCA2P51531 1590 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 TUBGCP6Q96RT7 1819 aa1.96□□□□□ -2.1
SHCBP1-202ENST00000563219 ABCB11O95342 1321 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 IGKV1-6A0A0C4DH72 117 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 LOC389332A0A1B0GUA5 103 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 CEACAM18A8MTB9 384 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 BTNL10A8MVZ5 291 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 CENPBD1B2RD01 187 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 CDIPTO14735 213 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 TCAPO15273 167 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 MYO1DO94832 1006 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 CYB5R3P00387 301 aaPredicted RBP1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 IGKV1-39P01597 117 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 IGKV1D-39P04432 117 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 IL1RNP18510 177 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 TEAD1P28347 426 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 KDELR2P33947 212 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 CCL23P55773 120 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 OR10A3P58181 314 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 UBE2G2P60604 165 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 PFN3P60673 137 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 ELF3P78545 371 aaPredicted RBP1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 ITGB3BPQ13352 177 aaPredicted RBP1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 OR4D1Q15615 310 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 CEACAM16Q2WEN9 425 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 FAM71E1Q6IPT2 247 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 FAM173BQ6P4H8 233 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF880Q6PDB4 577 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 TPGS1Q6ZTW0 290 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF101Q8IZC7 436 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 STK40Q8N2I9 435 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 C17orf78Q8N4C9 275 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 SLC25A29Q8N8R3 303 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 OR2M7Q8NG81 312 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 OR4K17Q8NGC6 315 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 OR9A2Q8NGT5 310 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 OR2Y1Q8NGV0 311 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 OR6K3Q8NGY3 331 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 NELFBQ8WX92 580 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 ESR2Q92731 530 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 FXYD5Q96DB9 178 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 OR10C1Q96KK4 312 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 TAPBPLQ9BX59 468 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF436Q9C0F3 470 aaPredicted RBP1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 NXF2Q9GZY0 626 aaKnown RBP1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 SLC25A31Q9H0C2 315 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 ASB7Q9H672 318 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 PLEKHF2Q9H8W4 249 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 UCK1Q9HA47 277 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 EXOSC4Q9NPD3 245 aaKnown RBP1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 C8orf4Q9NR00 106 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 RBM22Q9NW64 420 aaKnown RBP eCLIP1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 RBM12B-AS1Q9P1G2 102 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 HMGXB4Q9UGU5 601 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 KLF13Q9Y2Y9 288 aaPredicted RBP1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 INSIG2Q9Y5U4 225 aa1.95□□□□□ -2.1
SHCBP1-202ENST00000563219 ELP1O95163 1332 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 PEG3Q9GZU2 1588 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 CENPVL3A0A0U1RRI6 287 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 KIR2DS1A0A191URI9 304 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 GOLGA8KD6RF30 607 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 H3BQV1 296 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 GOLGA8RI6L899 631 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 PLPP3O14495 311 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 MPZL2O60487 215 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF324O75467 553 aaPredicted RBP1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 CNMDO75829 334 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 SCO1O75880 301 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 OR2A4O95047 310 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 MPZL1O95297 269 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 HLA-DRAP01903 254 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 IL4P05112 153 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 CD40LGP29965 261 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 HSPA13P48723 471 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNHIT3Q15649 155 aaPredicted RBP1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 TOMM34Q15785 309 aaPredicted RBP1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 CEACAM21Q3KPI0 293 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 TTMPQ5BVD1 217 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 IGFL3Q6UXB1 125 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 SHISA6Q6ZSJ9 500 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 LINC00596Q86U02 117 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 AKAP14Q86UN6 197 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 CRLF3Q8IUI8 442 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 UBALD2Q8IYN6 164 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 ORMDL3Q8N138 153 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 ZNF709Q8N972 641 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 GATD1Q8NB37 220 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 NECAP1Q8NC96 275 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 OR5M1Q8NGP8 315 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 OR2K2Q8NGT1 345 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 ACTL9Q8TC94 416 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 RBPMSQ93062 196 aaKnown RBP1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 WDR34Q96EX3 536 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 MRAP2Q96G30 205 aa1.94□□□□□ -2.1
SHCBP1-202ENST00000563219 ZBED3Q96IU2 234 aaPredicted RBP1.94□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms