RNA–Protein interactions for RNA: ENST00000562609.2

GTF3C1-203, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 2,824 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-203ENST00000562609 OGFOD3Q6PK18 319 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 SLC25A26Q70HW3 274 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 KIR2DL5AQ8N109 375 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 HAS2Q92819 552 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 MRPL24Q96A35 216 aaKnown RBP12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 ADOQ96SZ5 270 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 CDX2Q99626 313 aaPredicted RBP12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 DNAJC4Q9NNZ3 241 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 KIAA1456Q9P272 454 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 GAB2Q9UQC2 676 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 RHBDD3Q9Y3P4 386 aa12.29□□□□□ -0.44
GTF3C1-203ENST00000562609 B4DEV8 164 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 IFNA21P01568 189 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 CXCL12P48061 93 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 TIPARPQ7Z3E1 657 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 P4HA3Q7Z4N8 544 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 NOXO1Q8NFA2 376 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 TMEM18Q96B42 140 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 ELOVL1Q9BW60 279 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 RTN4RQ9BZR6 473 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 ST6GALNAC1Q9NSC7 600 aaPredicted RBP12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 WNT16Q9UBV4 365 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 KIF26BQ2KJY2 2108 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 SERINC4A6NH21 518 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 GPR137BO60478 399 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 DIRAS3O95661 229 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 HSPB1P04792 205 aaKnown RBP12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 OR3A2P47893 321 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 EMP2P54851 167 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 RABEPKQ7Z6M1 372 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 OR2G3Q8NGZ4 309 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 DNASE2BQ8WZ79 361 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 AK3Q9UIJ7 227 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 HHLA2Q9UM44 414 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 B3GALT5Q9Y2C3 310 aa12.28□□□□□ -0.44
GTF3C1-203ENST00000562609 IGHV3-20A0A0C4DH32 117 aa12.27□□□□□ -0.44
GTF3C1-203ENST00000562609 RENP00797 406 aa12.27□□□□□ -0.44
GTF3C1-203ENST00000562609 AMY2BP19961 511 aa12.27□□□□□ -0.44
GTF3C1-203ENST00000562609 SLC37A1P57057 533 aa12.27□□□□□ -0.44
GTF3C1-203ENST00000562609 NSDHLQ15738 373 aa12.27□□□□□ -0.44
GTF3C1-203ENST00000562609 COA6Q5JTJ3 125 aaKnown RBP12.27□□□□□ -0.44
GTF3C1-203ENST00000562609 LYPD6Q86Y78 171 aa12.27□□□□□ -0.44
GTF3C1-203ENST00000562609 LOC107986453A0A1B0GWG9 222 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 H3BMH7 237 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 K7ESF4 209 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 TFPI2P48307 235 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 QRFPP83859 136 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 FOXF1Q12946 379 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 ZNF66Q6ZN08 573 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 LHFPL1Q86WI0 220 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 CATSPERDQ86XM0 798 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 NKAIN3Q8N8D7 197 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 OR52N4Q8NGI2 321 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 WFIKKN1Q96NZ8 548 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 TSPAN32Q96QS1 320 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 GAL3ST2Q9H3Q3 398 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 FKBP11Q9NYL4 201 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 OSGIN2Q9Y236 505 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 HIF3AQ9Y2N7 669 aa12.27□□□□□ -0.45
GTF3C1-203ENST00000562609 A0A1B0GU03 582 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 H0YIG0 161 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 HPRT1P00492 218 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 GUSBP08236 651 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 NOVA1P51513 510 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 VAMP2P63027 116 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 HSF1Q00613 529 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 ZNF141Q15928 474 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 TAF9Q16594 264 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 C16orf47Q6ZP98 133 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 LRRC75AQ8NAA5 344 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 FGGYQ96C11 551 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 ZPBPQ9BS86 351 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 ST6GALNAC5Q9BVH7 336 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 SRD5A3Q9H8P0 318 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 MRPL22Q9NWU5 206 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 EMC9Q9Y3B6 208 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 SIT1Q9Y3P8 196 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 WISP1O95388 367 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 CYB5R3P00387 301 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 PDGFBP01127 241 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 OPN1MWP04001 364 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 OPN1MW2P0DN77 364 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 OPN1MW3P0DN78 364 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 RPL23AP62750 156 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 ZNF506Q5JVG8 444 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 WDR25Q64LD2 544 aaPredicted RBP12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 SLC26A10Q8NG04 563 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 FGF21Q9NSA1 209 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 TMEM242Q9NWH2 141 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 EHFQ9NZC4 300 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 C14orf166Q9Y224 244 aaKnown RBP12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 NCOR1O75376 2440 aa12.26□□□□□ -0.45
GTF3C1-203ENST00000562609 IGKV1D-42A0A075B6H8 117 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 LNP1A1A4G5 178 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 FAM221AA4D161 298 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 ITGB1BP1O14713 200 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 SOCS1O15524 211 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 DUX1O43812 170 aa12.25□□□□□ -0.45
GTF3C1-203ENST00000562609 IL6RP08887 468 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms