RNA–Protein interactions for RNA: ENST00000561431.1

LRRC28-222, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 754 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-222ENST00000561431 HSD17B11Q8NBQ5 300 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 ATP6V1C2Q8NEY4 427 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 OR5AR1Q8NGP9 310 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 OR6K6Q8NGW6 343 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 OR10X1Q8NGY0 326 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 OR5K2Q8NHB8 316 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 LYPD6BQ8NI32 183 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 RDH11Q8TC12 318 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 KCTD4Q8WVF5 259 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 RASSF5Q8WWW0 418 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 CCDC126Q96EE4 140 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 ZNF597Q96LX8 424 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 BIRC8Q96P09 236 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 ZIM3Q96PE6 472 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 TSNAXQ99598 290 aaKnown RBP3.33□□□□□ -1.88
LRRC28-222ENST00000561431 IKZF5Q9H5V7 419 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 TMEM38AQ9H6F2 299 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 ZNF665Q9H7R5 613 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 BEX1Q9HBH7 125 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 TMBIM4Q9HC24 238 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 HRASLS2Q9NWW9 162 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 PRODH2Q9UF12 536 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 BTNL2Q9UIR0 455 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 BTRCQ9Y297 605 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 HEBP2Q9Y5Z4 205 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 PTPRQQ9UMZ3 2332 aa3.33□□□□□ -1.88
LRRC28-222ENST00000561431 ACACAQ13085 2346 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 A0A0B4J2E0 115 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 A0A1B0GX12 115 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 FAM74A7A6NL05 159 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 ATP6V1G2-DDX39BF2Z307 99 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 J3QLI3 93 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 K7EN84 100 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 PSMD12O00232 456 aaPredicted RBP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 CXCR6O00574 342 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 CDIPTO14735 213 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 TCAPO15273 167 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 NUPL2O15504 423 aaKnown RBP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 ARPC5O15511 151 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 MLNRO43193 412 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 HCRTR1O43613 425 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 CHP2O43745 196 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 SUPT3HO75486 399 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 BANF1O75531 89 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 HPP00738 406 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 CD5P06127 495 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 GSTA1P08263 222 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 HCKP08631 526 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 WNT2P09544 360 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 OR56A5P0C7T3 313 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 ADORA3P0DMS8 318 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 PVRP15151 417 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 H2AFXP16104 143 aaPredicted RBP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 UGT2B7P16662 529 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 OGNP20774 298 aaKnown RBP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 C4BPBP20851 252 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 F8A1P23610 371 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 FASP25445 335 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 ELK4P28324 431 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 NTSP30990 170 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 LEPP41159 167 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 TTPAP49638 278 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 HLCSP50747 726 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 CDC42P60953 191 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 GNG11P61952 73 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 RPS4XP62701 263 aaKnown RBP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 SLC35B1P78383 322 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 TLE4Q04727 773 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 SRSF9Q13242 221 aaKnown RBP eCLIP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 KLF5Q13887 457 aaPredicted RBP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 LY6DQ14210 128 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 ZIC1Q15915 447 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 CCSMST1Q4G0I0 132 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 FAM74A3Q4VXF1 159 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 DMRTC1Q5HYR2 192 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 SOHLH1Q5JUK2 328 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 RPL13AP3Q6NVV1 102 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 FAHD2BQ6P2I3 314 aaPredicted RBP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 TMEM64Q6YI46 380 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 TMEM135Q86UB9 458 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 LRRTM1Q86UE6 522 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 OOSP2Q86WS3 158 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 SLC35F2Q8IXU6 374 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 STX19Q8N4C7 294 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 ZNF561Q8N587 486 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 DHRSXQ8N5I4 330 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 CLDN22Q8N7P3 220 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 OR4E2Q8NGC2 313 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 OR9Q2Q8NGE9 314 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 OR52B6Q8NGF0 335 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 OR10W1Q8NGF6 305 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 OR6K3Q8NGY3 331 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 OR2AE1Q8NHA4 323 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 FAM45AQ8TCE6 357 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 LCN9Q8WX39 176 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 MAGOHBQ96A72 148 aaKnown RBP3.32□□□□□ -1.88
LRRC28-222ENST00000561431 PNPLA2Q96AD5 504 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 WBP1Q96G27 269 aa3.32□□□□□ -1.88
LRRC28-222ENST00000561431 FAHD2AQ96GK7 314 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms