RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 FTMTQ8N4E7 242 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 ASCC1Q8N9N2 400 aaKnown RBP4.05□□□□□ -1.76
HERC1-213ENST00000561359 CLRN3Q8NCR9 226 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 CSNK2A3Q8NEV1 391 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 ZNF671Q8TAW3 534 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 ZNF596Q8TC21 504 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 SLC26A7Q8TE54 656 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP4.05□□□□□ -1.76
HERC1-213ENST00000561359 GTF2H4Q92759 462 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 RNF183Q96D59 192 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 ATP6V1G3Q96LB4 118 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 TSSK2Q96PF2 358 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 COPS4Q9BT78 406 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 ELOVL1Q9BW60 279 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 PAIP1Q9H074 479 aaKnown RBP4.05□□□□□ -1.76
HERC1-213ENST00000561359 TMEM38AQ9H6F2 299 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 NMNAT1Q9HAN9 279 aaPredicted RBP4.05□□□□□ -1.76
HERC1-213ENST00000561359 PNRC2Q9NPJ4 139 aaKnown RBP4.05□□□□□ -1.76
HERC1-213ENST00000561359 OR14J1Q9UGF5 321 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 RIMS3Q9UJD0 308 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 STUB1Q9UNE7 303 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 VSIG4Q9Y279 399 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 DNAH6Q9C0G6 4158 aa4.05□□□□□ -1.76
HERC1-213ENST00000561359 hCG_2014768A0A024R1R8 64 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 FAM172BPA6NC97 362 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 NCBP2LA6PVI3 153 aaKnown RBP4.04□□□□□ -1.76
HERC1-213ENST00000561359 ZNF850A8MQ14 1090 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 FAM25EA8MYX2 175 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 EFCAB9A8MZ26 197 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 LINC01619G3V211 115 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 DCTN6O00399 190 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 SOCS2O14508 198 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 TMEM127O75204 238 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 GASTP01350 101 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 IGHG4P01861 327 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 RHCEP18577 417 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 VDAC1P21796 283 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 PPIBP23284 216 aaKnown RBP4.04□□□□□ -1.76
HERC1-213ENST00000561359 PSMB8P28062 276 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 DCTDP32321 178 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 S100A5P33763 92 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 OR1E2P47887 323 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 RPL14P50914 215 aaKnown RBP4.04□□□□□ -1.76
HERC1-213ENST00000561359 GPM6AP51674 278 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 POLR2JP52435 117 aaKnown RBP4.04□□□□□ -1.76
HERC1-213ENST00000561359 NANOS3P60323 173 aaKnown RBP4.04□□□□□ -1.76
HERC1-213ENST00000561359 ESRRGP62508 458 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 RUNX1Q01196 453 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 NHLH2Q02577 135 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 PRDX4Q13162 271 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 PIN1Q13526 163 aaPredicted RBP4.04□□□□□ -1.76
HERC1-213ENST00000561359 FHL1Q13642 323 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 RBM39Q14498 530 aaKnown RBP4.04□□□□□ -1.76
HERC1-213ENST00000561359 EDDM3AQ14507 147 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 KPNB1Q14974 876 aaKnown RBP4.04□□□□□ -1.76
HERC1-213ENST00000561359 TAF13Q15543 124 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 NDUFA5Q16718 116 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 CNPY1Q3B7I2 92 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 ANKDD1AQ495B1 522 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 FAM76BQ5HYJ3 339 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 LRIF1Q5T3J3 769 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 TPTE2P1Q5T6R2 138 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 DNM1P34Q6PK57 102 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 SMARCD3Q6STE5 483 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 PTCHD4Q6ZW05 846 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 TRMT10CQ7L0Y3 403 aaKnown RBP4.04□□□□□ -1.76
HERC1-213ENST00000561359 GDPD3Q7L5L3 318 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 FAM122BQ7Z309 247 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 TIGD4Q8IY51 512 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 LINC00471Q8N535 108 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 EIF1ADQ8N9N8 165 aaKnown RBP4.04□□□□□ -1.76
HERC1-213ENST00000561359 C11orf65Q8NCR3 313 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 CCDC197Q8NCU1 140 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 OR4C15Q8NGM1 316 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 OR13C2Q8NGS9 318 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 OR56B4Q8NH76 319 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 OR5P3Q8WZ94 311 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 SPSB4Q96A44 273 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 CREB3L1Q96BA8 519 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 REEP6Q96HR9 211 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 APOPT1Q96IL0 206 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 UBE2E2Q96LR5 201 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 HIST1H2AAQ96QV6 131 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 OR8B4Q96RC9 309 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 NDEL1Q9GZM8 345 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 OR51J1Q9H342 316 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 CCDC134Q9H6E4 229 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 PLEKHA3Q9HB20 300 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 ABCB9Q9NP78 766 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 AKIP1Q9NQ31 210 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 NDE1Q9NXR1 346 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 RASL12Q9NYN1 266 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 IL20Q9NYY1 176 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 SLC25A37Q9NYZ2 338 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 CYB5R1Q9UHQ9 305 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 PRELID1Q9Y255 219 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 FAM32AQ9Y421 112 aaKnown RBP4.04□□□□□ -1.76
HERC1-213ENST00000561359 MPC1Q9Y5U8 109 aa4.04□□□□□ -1.76
HERC1-213ENST00000561359 DNAH17Q9UFH2 4485 aa4.03□□□□□ -1.76
HERC1-213ENST00000561359 A0A0J9YWU9 116 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms