RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 C17orf107Q6ZR85 190 aa11.04□□□□□ -0.64
SMAD3-207ENST00000558763 MUC20Q8N307 709 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-207ENST00000558763 ZBTB8BQ8NAP8 495 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-207ENST00000558763 KLF14Q8TD94 323 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-207ENST00000558763 DYRK2Q92630 601 aa11.04□□□□□ -0.64
SMAD3-207ENST00000558763 OR51I2Q9H344 312 aa11.04□□□□□ -0.64
SMAD3-207ENST00000558763 PLEKHJ1Q9NW61 149 aa11.04□□□□□ -0.64
SMAD3-207ENST00000558763 ERRFI1Q9UJM3 462 aaPredicted RBP11.04□□□□□ -0.64
SMAD3-207ENST00000558763 PLEKHA6Q9Y2H5 1048 aa11.04□□□□□ -0.64
SMAD3-207ENST00000558763 PLCE1Q9P212 2302 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 FABP7O15540 132 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 CREBL2O60519 120 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-207ENST00000558763 ANXA3P12429 323 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 SNU13P55769 128 aaKnown RBP11.03□□□□□ -0.64
SMAD3-207ENST00000558763 FGF12P61328 243 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 CDSNQ15517 529 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 C2orf68Q2NKX9 166 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 LHFPL1Q86WI0 220 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 SPICQ8N5J4 248 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 OR1J1Q8NGS3 322 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 DACT3Q96B18 629 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-207ENST00000558763 POM121Q96HA1 1249 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 PIPOXQ9P0Z9 390 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 NKX2-6A6NCS4 301 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 ZG16O60844 167 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 PDCD6O75340 191 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 CCKARP32238 428 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 GNG3P63215 75 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 FAM27E3Q08E93 113 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 PDCD1Q15116 288 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 ACTBL2Q562R1 376 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 Q5BKY6 102 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 LAMTOR1Q6IAA8 161 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 HAGHLQ6PII5 290 aaPredicted RBP11.03□□□□□ -0.64
SMAD3-207ENST00000558763 BRICD5Q6PL45 260 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 ARRDC1Q8N5I2 433 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 CA5BP1Q8WTZ4 195 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 S100PBPQ96BU1 408 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 DLL4Q9NR61 685 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 PLSCR3Q9NRY6 295 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 JKAMPQ9P055 326 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 RCC2Q9P258 522 aaKnown RBP11.03□□□□□ -0.64
SMAD3-207ENST00000558763 ZNF69Q9UC07 566 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 AMDHD2Q9Y303 409 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 BOLA1Q9Y3E2 137 aa11.03□□□□□ -0.64
SMAD3-207ENST00000558763 FAM90A10PA6NDY2 464 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 FAM90A18PA6NE21 464 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 FAM90A16PA6NEW6 464 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 FAM90A20PA6NIJ5 464 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 FAM90A8PA6NJQ4 464 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 FAM90A7PA6NKC0 464 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 FAM90A22PA8MWA6 464 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 FAM90A12PA8MX19 464 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 FAM90A5PA8MXJ8 464 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 FAM90A23PA8MXZ1 464 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 C3orf80F5H4A9 247 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 FCGR3AP08637 254 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 OR4E1P0C645 316 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 FAM90A15PP0C7V4 464 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 FAM90A13PP0C7W8 464 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 FAM90A14PP0C7W9 464 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 FAM90A24PP0C7X0 464 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 AMY2BP19961 511 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 UBE2MP61081 183 aaKnown RBP11.02□□□□□ -0.65
SMAD3-207ENST00000558763 IL24Q13007 206 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 MSMPQ1L6U9 139 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 TIMM23BQ5SRD1 257 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 AADACL3Q5VUY0 350 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 C22orf34Q6ZV56 151 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 OVCH2Q7RTZ1 564 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 ZDHHC22Q8N966 263 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 OR11H4Q8NGC9 324 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 OR13G1Q8NGZ3 307 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 WDR89Q96FK6 387 aaPredicted RBP11.02□□□□□ -0.65
SMAD3-207ENST00000558763 ZNF488Q96MN9 340 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 ST6GALNAC5Q9BVH7 336 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 PKIBQ9C010 78 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 ZNF436Q9C0F3 470 aaPredicted RBP11.02□□□□□ -0.65
SMAD3-207ENST00000558763 GPN1Q9HCN4 374 aaPredicted RBP11.02□□□□□ -0.65
SMAD3-207ENST00000558763 ZNF222Q9UK12 451 aa11.02□□□□□ -0.65
SMAD3-207ENST00000558763 MLNRO43193 412 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 RHBDL1O75783 438 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 DTYMKP23919 212 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 PMELP40967 661 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 PEG10Q86TG7 708 aaKnown RBP11.01□□□□□ -0.65
SMAD3-207ENST00000558763 SLC25A42Q86VD7 318 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 ZNF573Q86YE8 665 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 OR5AP2Q8NGF4 316 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 ZNF431Q8TF32 576 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-207ENST00000558763 PCDHB16Q9NRJ7 776 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 H3BUI4 141 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 J3QT63 122 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 OR2A4O95047 310 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 KITLGP21583 273 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 ERP29P30040 261 aaKnown RBP11.01□□□□□ -0.65
SMAD3-207ENST00000558763 ASCL1P50553 236 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 NAAAQ02083 359 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 DHRS2Q13268 280 aa11.01□□□□□ -0.65
SMAD3-207ENST00000558763 ZNF660Q6AZW8 331 aaPredicted RBP11.01□□□□□ -0.65
SMAD3-207ENST00000558763 NLRC3Q7RTR2 1065 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms