RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 CACNG5Q9UF02 275 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 IGHV5-51A0A0C4DH38 117 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 H7C2G1 150 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 CEACAM5P06731 702 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 CD1BP29016 333 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 ABLIM2Q6H8Q1 611 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 SLC26A10Q8NG04 563 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 SEC11CQ9BY50 192 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 NAT8Q9UHE5 227 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 TRGV10A0A0A0MS01 117 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 ZNF788Q6ZQV5 615 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 MCHR2Q969V1 340 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 TMEM147Q9BVK8 224 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 SERPINE3A8MV23 424 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 HRASP01112 189 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 GABRA1P14867 456 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 HYAL1Q12794 435 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 WDR38Q5JTN6 314 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 OR2V1Q8NHB1 315 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 PELI1Q96FA3 418 aa12.43□□□□□ -0.42
SPG11-210ENST00000558319 TMEFF2Q9UIK5 374 aaPredicted RBP12.43□□□□□ -0.42
SPG11-210ENST00000558319 POLR2GP62487 172 aaKnown RBP eCLIP12.42□□□□□ -0.42
SPG11-210ENST00000558319 BSXQ3C1V8 233 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 C1QTNF12Q5T7M4 302 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 TSPO2Q5TGU0 170 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 TMEM215Q68D42 235 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 CALHM3Q86XJ0 350 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 OR4F17Q8NGA8 305 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 NTNG2Q96CW9 530 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 GPR61Q9BZJ8 451 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 LOC389332A0A1B0GUA5 103 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 ATP6V1FQ16864 119 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 ZNF774Q6NX45 483 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 TMEM65Q6PI78 240 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 OR1B1Q8NGR6 318 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 RER1O15258 196 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 ANKRD34CP0C6C1 535 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 BPIFA4PQ86YQ2 179 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 FLYWCH2Q96CP2 140 aaKnown RBP12.42□□□□□ -0.42
SPG11-210ENST00000558319 TBX15Q96SF7 602 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 SOX8P57073 446 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 OR2C3Q8N628 320 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 TRBV23-1A0A0A0MS06 115 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 A6NDN8 102 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 EDIL3O43854 480 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 CTAG2O75638 210 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 CYC1P08574 325 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 SCGB1A1P11684 91 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 IER3P46695 156 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 FUT6P51993 359 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 LYZP61626 148 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 D2HGDHQ8N465 521 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 PRSS50Q9UI38 385 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 PHIPQ8WWQ0 1821 aa12.42□□□□□ -0.42
SPG11-210ENST00000558319 C7orf77A4D0Y5 90 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 SIAH2O43255 324 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 GALNSP34059 522 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 BSGP35613 385 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 HINT1P49773 126 aaPredicted RBP12.41□□□□□ -0.42
SPG11-210ENST00000558319 ZNF260Q3ZCT1 412 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 HSD17B13Q7Z5P4 300 aaPredicted RBP12.41□□□□□ -0.42
SPG11-210ENST00000558319 NOXO1Q8NFA2 376 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 OR11H7Q8NGC8 314 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 OR4C3Q8NH37 302 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 NTMQ9P121 344 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 ARRDC5A6NEK1 342 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 FAM109BQ6ICB4 259 aaPredicted RBP12.41□□□□□ -0.42
SPG11-210ENST00000558319 C5orf17Q8NAS9 161 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 MRGPRDQ8TDS7 321 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 RPEQ96AT9 228 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 YBX2Q9Y2T7 364 aaKnown RBP12.41□□□□□ -0.42
SPG11-210ENST00000558319 ZNF716A6NP11 495 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 FZD5Q13467 585 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 ZNF141Q15928 474 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 ARRDC1Q8N5I2 433 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 OR10A7Q8NGE5 316 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 ADAT3Q96EY9 351 aaPredicted RBP12.41□□□□□ -0.42
SPG11-210ENST00000558319 ATG101Q9BSB4 218 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 MRPL37Q9BZE1 423 aaKnown RBP12.41□□□□□ -0.42
SPG11-210ENST00000558319 TMED3Q9Y3Q3 217 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 ALG1L2C9J202 215 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 MELTFP08582 738 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 INHBBP09529 407 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 NMUP48645 174 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 ZNF137PP52743 207 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 MORN4Q8NDC4 146 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 IFITM10A6NMD0 228 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 SP1P08047 785 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 HIST1H1DP16402 221 aaKnown RBP12.41□□□□□ -0.42
SPG11-210ENST00000558319 MPLP40238 635 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 PRSS54Q6PEW0 395 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 ZNF841Q6ZN19 808 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 SSX8Q7RTT4 187 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 ABI3BPQ7Z7G0 1075 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 NEIL1Q96FI4 390 aaPredicted RBP12.41□□□□□ -0.42
SPG11-210ENST00000558319 FOXB1Q99853 325 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 COA4Q9NYJ1 87 aa12.41□□□□□ -0.42
SPG11-210ENST00000558319 TCRBV5S1A1TA0A578 114 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 STAG3L2P0CL84 134 aa12.4□□□□□ -0.42
SPG11-210ENST00000558319 SPICQ8N5J4 248 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms