RNA–Protein interactions for RNA: ENST00000558288.1

HMG20A-204, Transcript of high mobility group 20A, humanhuman

Gene HMG20A, Length 3,558 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-204ENST00000558288 ABHD5Q8WTS1 349 aa4.45□□□□□ -1.7
HMG20A-204ENST00000558288 HPSE2Q8WWQ2 592 aa4.45□□□□□ -1.7
HMG20A-204ENST00000558288 MMABQ96EY8 250 aaPredicted RBP4.45□□□□□ -1.7
HMG20A-204ENST00000558288 C5orf34Q96MH7 638 aa4.45□□□□□ -1.7
HMG20A-204ENST00000558288 NXF5Q9H1B4 397 aaKnown RBP4.45□□□□□ -1.7
HMG20A-204ENST00000558288 MED29Q9NX70 200 aa4.45□□□□□ -1.7
HMG20A-204ENST00000558288 VSX1Q9NZR4 365 aaPredicted RBP4.45□□□□□ -1.7
HMG20A-204ENST00000558288 TUBD1Q9UJT1 453 aa4.45□□□□□ -1.7
HMG20A-204ENST00000558288 HSF4Q9ULV5 492 aa4.45□□□□□ -1.7
HMG20A-204ENST00000558288 ZNF462Q96JM2 2506 aa4.45□□□□□ -1.7
HMG20A-204ENST00000558288 ZZEF1O43149 2961 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 TMED7-TICAM2A0A0A6YYA0 188 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 A0A1B0GWJ7 208 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 A8MWP6 167 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 C9J4A7 227 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 ST8SIA3O43173 380 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 TNFSF14O43557 240 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 FOXS1O43638 330 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 SRSF10O75494 262 aaKnown RBP4.44□□□□□ -1.7
HMG20A-204ENST00000558288 WISP1O95388 367 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 HPNP05981 417 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 SRP19P09132 144 aaKnown RBP4.44□□□□□ -1.7
HMG20A-204ENST00000558288 FOLR1P15328 257 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 IL11P20809 199 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 FUT3P21217 361 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 GLIPR1P48060 266 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 SUCLG1P53597 346 aaKnown RBP4.44□□□□□ -1.7
HMG20A-204ENST00000558288 UCP2P55851 309 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 HLA-DRB3P79483 266 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 FOXK1P85037 733 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 POU3F1Q03052 451 aaPredicted RBP4.44□□□□□ -1.7
HMG20A-204ENST00000558288 TNFRSF9Q07011 255 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 NKAIN1Q4KMZ8 207 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 SLC25A24Q6NUK1 477 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 ZNF880Q6PDB4 577 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 NUP54Q7Z3B4 507 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 SFTPA2Q8IWL1 248 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 ARHGEF39Q8N4T4 335 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 NECAP1Q8NC96 275 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 OR52M1Q8NGK5 317 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 OR5R1Q8NH85 324 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 OR14L1PQ8NHC6 308 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 STT3BQ8TCJ2 826 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 HOXB13Q92826 284 aaPredicted RBP4.44□□□□□ -1.7
HMG20A-204ENST00000558288 NOL4LQ96MY1 436 aaPredicted RBP4.44□□□□□ -1.7
HMG20A-204ENST00000558288 NUDT22Q9BRQ3 303 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 CABLES2Q9BTV7 478 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 NDUFAF3Q9BU61 184 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 EMC6Q9BV81 110 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 RTN4RQ9BZR6 473 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 FAM60AQ9NP50 221 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 PLEKHJ1Q9NW61 149 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 GAB2Q9UQC2 676 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 A0A0J9YY10 115 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 FAM24AA6NFZ4 105 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 ZFP92A6NM28 416 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 CEACAM18A8MTB9 384 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 K7N7A8 449 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 HSPA12AO43301 675 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 DFFBO76075 338 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 NXPH3O95157 252 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 ONECUT2O95948 504 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 MT-ATP6P00846 226 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 SFTPCP11686 197 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 PGCP20142 388 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 ATP6V0CP27449 155 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 SLC6A8P48029 635 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 FZD2Q14332 565 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 SLC10A1Q14973 349 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 FAM189A2Q15884 450 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 CLEC12BQ2HXU8 276 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 TMEM176BQ3YBM2 270 aaPredicted RBP4.44□□□□□ -1.7
HMG20A-204ENST00000558288 GPR157Q5UAW9 335 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 HLA-DQA1Q5Y7H0 255 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 C6orf201Q7Z4U5 140 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 LYPD6Q86Y78 171 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 MRPL41Q8IXM3 137 aaKnown RBP4.44□□□□□ -1.7
HMG20A-204ENST00000558288 OR13D1Q8NGV5 346 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 OR2AJ1Q8NGZ0 328 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 RTN4IP1Q8WWV3 396 aaPredicted RBP4.44□□□□□ -1.7
HMG20A-204ENST00000558288 RAB24Q969Q5 203 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 HDHD3Q9BSH5 251 aaPredicted RBP4.44□□□□□ -1.7
HMG20A-204ENST00000558288 GPR84Q9NQS5 396 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 CUTCQ9NTM9 273 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 FAM206AQ9NX38 181 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 LRFN1Q9P244 771 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 GNG13Q9P2W3 67 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 FOXD3Q9UJU5 478 aaPredicted RBP4.44□□□□□ -1.7
HMG20A-204ENST00000558288 PITPNC1Q9UKF7 332 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 CBY1Q9Y3M2 126 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 AKAP13Q12802 2813 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 IGKV1D-8A0A087WSZ0 117 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 A0A087WWC5 75 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 IGKV1D-43A0A0B4J1Z2 117 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 FAM221AA4D161 298 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 H0YIG0 161 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 PLPP3O14495 311 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 PHF1O43189 567 aaPredicted RBP4.44□□□□□ -1.7
HMG20A-204ENST00000558288 ADH1BP00325 375 aa4.44□□□□□ -1.7
HMG20A-204ENST00000558288 ZNF728P0DKX0 622 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms