RNA–Protein interactions for RNA: ENST00000558036.5

SNRPA1-205, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 2,108 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-205ENST00000558036 POLDIP2Q9Y2S7 368 aa17.3■□□□□ 0.36
SNRPA1-205ENST00000558036 ROS1P08922 2347 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 A0A1B0GWJ7 208 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 PDCD6O75340 191 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 HRH1P35367 487 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 FAUP35544 74 aaKnown RBP17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 NEUROG1Q92886 237 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 ELMOD3Q96FG2 381 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 HSF4Q9ULV5 492 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 PRB1P04280 392 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 FUT3P21217 361 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 CD300CQ08708 224 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 ADIPOQQ15848 244 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 NRIP2Q9BQI9 281 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 BEX2Q9BXY8 128 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 C20orf85Q9H1P6 137 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 WDR13Q9H1Z4 485 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 ESRP2Q9H6T0 727 aaKnown RBP17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 ZNF442Q9H7R0 627 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 BEX1Q9HBH7 125 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 LRBAP50851 2863 aa17.29■□□□□ 0.36
SNRPA1-205ENST00000558036 ICE1Q9Y2F5 2266 aa17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 WNT9BO14905 357 aa17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 PMP2P02689 132 aa17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 AMY2AP04746 511 aa17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 OR4A8P0C604 315 aa17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 PGA5P0DJD9 388 aa17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 ERVK11-1P61568 191 aa17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 TFF3Q07654 80 aa17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 NHLRC3Q5JS37 347 aa17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 NCMAPQ5T1S8 102 aa17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 DMRTC2Q8IXT2 367 aaPredicted RBP17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 BBC3Q96PG8 261 aaPredicted RBP17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 OCSTAMPQ9BR26 566 aa17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 NUBP2Q9Y5Y2 271 aa17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 ANKHD1Q8IWZ3 2542 aaKnown RBP17.28■□□□□ 0.36
SNRPA1-205ENST00000558036 SHISA9B4DS77 424 aa17.27■□□□□ 0.36
SNRPA1-205ENST00000558036 NXPH2O95156 264 aa17.27■□□□□ 0.36
SNRPA1-205ENST00000558036 CD74P04233 296 aa17.27■□□□□ 0.36
SNRPA1-205ENST00000558036 SELENOVP59797 346 aa17.27■□□□□ 0.36
SNRPA1-205ENST00000558036 WDR82Q6UXN9 313 aa17.27■□□□□ 0.36
SNRPA1-205ENST00000558036 BPIFB2Q8N4F0 458 aa17.27■□□□□ 0.36
SNRPA1-205ENST00000558036 SPERTQ8NA61 448 aa17.27■□□□□ 0.36
SNRPA1-205ENST00000558036 GALNT11Q8NCW6 608 aa17.27■□□□□ 0.36
SNRPA1-205ENST00000558036 OR2V2Q96R30 315 aa17.27■□□□□ 0.36
SNRPA1-205ENST00000558036 SLC6A7Q99884 636 aa17.27■□□□□ 0.36
SNRPA1-205ENST00000558036 COL12A1Q99715 3063 aa17.27■□□□□ 0.36
SNRPA1-205ENST00000558036 IGKV1D-8A0A087WSZ0 117 aa17.27■□□□□ 0.35
SNRPA1-205ENST00000558036 hCG_1807616A0A1W2PRN6 198 aa17.27■□□□□ 0.35
SNRPA1-205ENST00000558036 TUBAL3A6NHL2 446 aa17.27■□□□□ 0.35
SNRPA1-205ENST00000558036 ARL6IP1Q15041 203 aa17.27■□□□□ 0.35
SNRPA1-205ENST00000558036 MICBQ29980 383 aa17.27■□□□□ 0.35
SNRPA1-205ENST00000558036 C4orf17Q53FE4 359 aa17.27■□□□□ 0.35
SNRPA1-205ENST00000558036 OR4K15Q8NH41 348 aa17.27■□□□□ 0.35
SNRPA1-205ENST00000558036 CMSS1Q9BQ75 279 aaKnown RBP17.27■□□□□ 0.35
SNRPA1-205ENST00000558036 COPZ2Q9P299 210 aa17.27■□□□□ 0.35
SNRPA1-205ENST00000558036 ALG5Q9Y673 324 aa17.27■□□□□ 0.35
SNRPA1-205ENST00000558036 HS3ST1O14792 307 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 SIAH2O43255 324 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 ZNF735P0CB33 412 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 ZNF81P51508 661 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 SCGB2B2Q4G0G5 96 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 RNASE10Q5GAN6 216 aaKnown RBP17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 BTN2A1Q7KYR7 527 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 BEST4Q8NFU0 473 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 NEURL2Q9BR09 285 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 TLNRD1Q9H1K6 362 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 PLK3Q9H4B4 646 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 C1orf123Q9NWV4 160 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 ANAPC10Q9UM13 185 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 PLAUP00749 431 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 H2AFB2P0C5Z0 115 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 AMY2BP19961 511 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 DEDD2Q8WXF8 326 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 LRRC46Q96FV0 321 aa17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 ZNF107Q9UII5 783 aaPredicted RBP17.26■□□□□ 0.35
SNRPA1-205ENST00000558036 ARPC1BO15143 372 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-205ENST00000558036 MRPS15P82914 257 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-205ENST00000558036 MPV17LQ2QL34 196 aa17.25■□□□□ 0.35
SNRPA1-205ENST00000558036 AGAP6Q5VW22 663 aa17.25■□□□□ 0.35
SNRPA1-205ENST00000558036 HOGA1Q86XE5 327 aa17.25■□□□□ 0.35
SNRPA1-205ENST00000558036 ZCCHC24Q8N2G6 241 aaKnown RBP17.25■□□□□ 0.35
SNRPA1-205ENST00000558036 RDH5Q92781 318 aa17.25■□□□□ 0.35
SNRPA1-205ENST00000558036 GINS4Q9BRT9 223 aa17.25■□□□□ 0.35
SNRPA1-205ENST00000558036 FAM90A10PA6NDY2 464 aa17.24■□□□□ 0.35
SNRPA1-205ENST00000558036 FAM90A18PA6NE21 464 aa17.24■□□□□ 0.35
SNRPA1-205ENST00000558036 FAM90A16PA6NEW6 464 aa17.24■□□□□ 0.35
SNRPA1-205ENST00000558036 FAM90A20PA6NIJ5 464 aa17.24■□□□□ 0.35
SNRPA1-205ENST00000558036 FAM90A8PA6NJQ4 464 aa17.24■□□□□ 0.35
SNRPA1-205ENST00000558036 FAM90A7PA6NKC0 464 aa17.24■□□□□ 0.35
SNRPA1-205ENST00000558036 FAM90A22PA8MWA6 464 aa17.24■□□□□ 0.35
SNRPA1-205ENST00000558036 FAM90A12PA8MX19 464 aa17.24■□□□□ 0.35
SNRPA1-205ENST00000558036 FAM90A5PA8MXJ8 464 aa17.24■□□□□ 0.35
SNRPA1-205ENST00000558036 FAM90A23PA8MXZ1 464 aa17.24■□□□□ 0.35
SNRPA1-205ENST00000558036 NDUFB6O95139 128 aa17.24■□□□□ 0.35
SNRPA1-205ENST00000558036 FAM90A15PP0C7V4 464 aa17.24■□□□□ 0.35
SNRPA1-205ENST00000558036 FAM90A13PP0C7W8 464 aa17.24■□□□□ 0.35
SNRPA1-205ENST00000558036 FAM90A14PP0C7W9 464 aa17.24■□□□□ 0.35
SNRPA1-205ENST00000558036 FAM90A24PP0C7X0 464 aa17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms