RNA–Protein interactions for RNA: ENST00000557958.1

LDLR-206, Transcript of low density lipoprotein receptor, humanhuman

TSL 2

Gene LDLR, Length 1,881 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-206ENST00000557958 MYO7BQ6PIF6 2116 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 DOCK7Q96N67 2140 aa14.43□□□□□ -0.1
LDLR-206ENST00000557958 TRGV8A0A0C4DH27 118 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 OR5H1A6NKK0 313 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 OR7C1O76099 320 aaPredicted RBP14.42□□□□□ -0.1
LDLR-206ENST00000557958 HLA-AP01891 365 aaKnown RBP14.42□□□□□ -0.1
LDLR-206ENST00000557958 GLI4P10075 376 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 SNRPD2P62316 118 aaKnown RBP14.42□□□□□ -0.1
LDLR-206ENST00000557958 GRK1Q15835 563 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 PCSK4Q6UW60 755 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 NLRC3Q7RTR2 1065 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 MYPOPQ86VE0 399 aaPredicted RBP14.42□□□□□ -0.1
LDLR-206ENST00000557958 C12orf45Q8N5I9 185 aaPredicted RBP14.42□□□□□ -0.1
LDLR-206ENST00000557958 UXS1Q8NBZ7 420 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 SLAMF9Q96A28 289 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 BCL2L14Q9BZR8 327 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 OR2J1Q9GZK6 312 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 AK3Q9UIJ7 227 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 MGAT4AQ9UM21 535 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 OR2AT4A6NND4 320 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 CEACAM18A8MTB9 384 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 OR2A4O95047 310 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 CA6P23280 308 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 IL24Q13007 206 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 DHRS2Q13268 280 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 MPV17LQ2QL34 196 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 MARVELD3Q96A59 401 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 OR2A7Q96R45 310 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 SPACA1Q9HBV2 294 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 C12orf4Q9NQ89 552 aa14.42□□□□□ -0.1
LDLR-206ENST00000557958 ZNF629Q9UEG4 869 aaPredicted RBP14.42□□□□□ -0.1
LDLR-206ENST00000557958 ZNF230Q9UIE0 474 aaPredicted RBP14.42□□□□□ -0.1
LDLR-206ENST00000557958 IQCF6A8MYZ5 107 aa14.41□□□□□ -0.1
LDLR-206ENST00000557958 BCL3P20749 454 aa14.41□□□□□ -0.1
LDLR-206ENST00000557958 FPR2P25090 351 aa14.41□□□□□ -0.1
LDLR-206ENST00000557958 SURF2Q15527 256 aaPredicted RBP14.41□□□□□ -0.1
LDLR-206ENST00000557958 LIN54Q6MZP7 749 aa14.41□□□□□ -0.1
LDLR-206ENST00000557958 LPCAT3Q6P1A2 487 aa14.41□□□□□ -0.1
LDLR-206ENST00000557958 HAGHLQ6PII5 290 aaPredicted RBP14.41□□□□□ -0.1
LDLR-206ENST00000557958 LYG2Q86SG7 212 aa14.41□□□□□ -0.1
LDLR-206ENST00000557958 SLC25A40Q8TBP6 338 aa14.41□□□□□ -0.1
LDLR-206ENST00000557958 SULT4A1Q9BR01 284 aa14.41□□□□□ -0.1
LDLR-206ENST00000557958 CHIAQ9BZP6 476 aa14.41□□□□□ -0.1
LDLR-206ENST00000557958 FGF23Q9GZV9 251 aaPredicted RBP14.41□□□□□ -0.1
LDLR-206ENST00000557958 ZNF442Q9H7R0 627 aa14.41□□□□□ -0.1
LDLR-206ENST00000557958 CRIM1Q9NZV1 1036 aa14.41□□□□□ -0.1
LDLR-206ENST00000557958 ANXA10Q9UJ72 324 aa14.41□□□□□ -0.1
LDLR-206ENST00000557958 ZNF835Q9Y2P0 537 aa14.41□□□□□ -0.1
LDLR-206ENST00000557958 J3QT63 122 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 GOSR2O14653 212 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 NOS1APO75052 506 aaPredicted RBP14.4□□□□□ -0.1
LDLR-206ENST00000557958 SLC22A5O76082 557 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 RGS11O94810 467 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 IGLV1-44P01699 117 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 BMP5P22003 454 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 NPBWR2P48146 333 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 OVCH2Q7RTZ1 564 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 CCDC120Q96HB5 630 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 PHB2Q99623 299 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 CA10Q9NS85 328 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 NECAP2Q9NVZ3 263 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 SLC23A1Q9UHI7 598 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 POLDIP2Q9Y2S7 368 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.4□□□□□ -0.1
LDLR-206ENST00000557958 LRP5LA4QPB2 252 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 F5H5P2 479 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 AGFG2O95081 481 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 FCGR3AP08637 254 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 ZNF35P13682 527 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 CD34P28906 385 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 CEACAM8P31997 349 aaPredicted RBP14.4□□□□□ -0.1
LDLR-206ENST00000557958 CASP6P55212 293 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 IL13RA1P78552 427 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 TMEM211Q6ICI0 200 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 Q8IYB0 196 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 MARCH1Q8TCQ1 289 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 RADILQ96JH8 1075 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 ADAT1Q9BUB4 502 aaKnown RBP14.4□□□□□ -0.1
LDLR-206ENST00000557958 C1QTNF6Q9BXI9 259 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 ZNF286AQ9HBT8 521 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 MTCH1Q9NZJ7 389 aa14.4□□□□□ -0.1
LDLR-206ENST00000557958 LINC00862A6NCI5 91 aa14.39□□□□□ -0.11
LDLR-206ENST00000557958 CECR9P0C854 216 aa14.39□□□□□ -0.11
LDLR-206ENST00000557958 C4BPBP20851 252 aa14.39□□□□□ -0.11
LDLR-206ENST00000557958 ESCO2Q56NI9 601 aa14.39□□□□□ -0.11
LDLR-206ENST00000557958 TMEM128Q5BJH2 165 aa14.39□□□□□ -0.11
LDLR-206ENST00000557958 TIMM23BQ5SRD1 257 aa14.39□□□□□ -0.11
LDLR-206ENST00000557958 LHFPL1Q86WI0 220 aa14.39□□□□□ -0.11
LDLR-206ENST00000557958 MAFIPQ8WZ33 124 aa14.39□□□□□ -0.11
LDLR-206ENST00000557958 MRGPRFQ96AM1 343 aa14.39□□□□□ -0.11
LDLR-206ENST00000557958 OR51I2Q9H344 312 aa14.39□□□□□ -0.11
LDLR-206ENST00000557958 OSGIN2Q9Y236 505 aa14.39□□□□□ -0.11
LDLR-206ENST00000557958 AUP1Q9Y679 476 aa14.39□□□□□ -0.11
LDLR-206ENST00000557958 A0A0G2JNJ9 132 aa14.38□□□□□ -0.11
LDLR-206ENST00000557958 TMEM210A6NLX4 147 aa14.38□□□□□ -0.11
LDLR-206ENST00000557958 EEF1E1-BLOC1S5C9J1V9 151 aa14.38□□□□□ -0.11
LDLR-206ENST00000557958 LILRA1O75019 489 aa14.38□□□□□ -0.11
LDLR-206ENST00000557958 AKR1C4P17516 323 aa14.38□□□□□ -0.11
LDLR-206ENST00000557958 VAMP1P23763 118 aa14.38□□□□□ -0.11
LDLR-206ENST00000557958 ZBTB25P24278 435 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 216.2 ms