RNA–Protein interactions for RNA: ENST00000557529.1

SHMT2-233, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 1,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-233ENST00000557529 F8VWA3 439 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 CDIPTO14735 213 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 NOS1APO75052 506 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-233ENST00000557529 RHBDL1O75783 438 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 PMP2P02689 132 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 THBDP07204 575 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 GRPP07492 148 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 PGA5P0DJD9 388 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 OR3A3P47888 321 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 ERVK11-1P61568 191 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 IKZF1Q13422 519 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 NKPD1Q17RQ9 610 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 MICBQ29980 383 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 CHRFAM7AQ494W8 412 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 SCGB2B2Q4G0G5 96 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 FIP1L1Q6UN15 594 aaKnown RBP10.61□□□□□ -0.71
SHMT2-233ENST00000557529 Q6ZR03 302 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 TMEM17Q86X19 198 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 CCDC107Q8WV48 283 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 RNASE6Q93091 150 aaKnown RBP10.61□□□□□ -0.71
SHMT2-233ENST00000557529 DACT3Q96B18 629 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-233ENST00000557529 NRIP2Q9BQI9 281 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 ALX4Q9H161 411 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-233ENST00000557529 TLNRD1Q9H1K6 362 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 MED28Q9H204 178 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 IFT22Q9H7X7 185 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 MSL2Q9HCI7 577 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 C12orf4Q9NQ89 552 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 ZNF701Q9NV72 531 aaPredicted RBP10.61□□□□□ -0.71
SHMT2-233ENST00000557529 POU2F3Q9UKI9 436 aa10.61□□□□□ -0.71
SHMT2-233ENST00000557529 SHANK1Q9Y566 2161 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 DPRXA6NFQ7 191 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 SNRPGP15A8MWD9 76 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 MCRIP1C9JLW8 97 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 F5H5P2 479 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 BOLA2-SMG1P6H3BVE0 249 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 PYCARD-AS1I3L0S3 204 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 RLN1P04808 185 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 CSN2P05814 226 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 CD200P41217 278 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 DAZAP2Q15038 168 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-233ENST00000557529 CD276Q5ZPR3 534 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 VHLLQ6RSH7 139 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 PCSK4Q6UW60 755 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 GLDNQ6ZMI3 551 aaPredicted RBP10.6□□□□□ -0.71
SHMT2-233ENST00000557529 BATF2Q8N1L9 274 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 ZDHHC22Q8N966 263 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 POC1AQ8NBT0 407 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 OR5AP2Q8NGF4 316 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 OR6F1Q8NGZ6 308 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 LILRB4Q8NHJ6 448 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 MRPL24Q96A35 216 aaKnown RBP10.6□□□□□ -0.71
SHMT2-233ENST00000557529 ZNF488Q96MN9 340 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 ZNF581Q9P0T4 197 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 ZNF221Q9UK13 617 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 ATMQ13315 3056 aa10.6□□□□□ -0.71
SHMT2-233ENST00000557529 TMEM82A0PJX8 343 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 UBE2QL1A1L167 161 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 A6NLC8 198 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 VSTM5A8MXK1 200 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 ABCD4O14678 606 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 NXPH2O95156 264 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 FCGR3AP08637 254 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 ARPC4P59998 168 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 TSPAN5P62079 268 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 CD300CQ08708 224 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 CBX3Q13185 183 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 MAB21L1Q13394 359 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 RBM39Q14498 530 aaKnown RBP10.59□□□□□ -0.71
SHMT2-233ENST00000557529 PDCD1Q15116 288 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 CDK10Q15131 360 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 GRK1Q15835 563 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 ST3GAL2Q16842 350 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 MSMPQ1L6U9 139 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 SPIN3Q5JUX0 258 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 SLC22A25Q6T423 547 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 LRP11Q86VZ4 500 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 PIAS4Q8N2W9 510 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-233ENST00000557529 OR13C8Q8NGS7 320 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 GTF3AQ92664 365 aaKnown RBP10.59□□□□□ -0.71
SHMT2-233ENST00000557529 WFIKKN1Q96NZ8 548 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 HS3ST6Q96QI5 342 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 SYT3Q9BQG1 590 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 HDHD3Q9BSH5 251 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-233ENST00000557529 PPA2Q9H2U2 334 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 RIMS4Q9H426 269 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-233ENST00000557529 ESRP2Q9H6T0 727 aaKnown RBP10.59□□□□□ -0.71
SHMT2-233ENST00000557529 MYOZ1Q9NP98 299 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-233ENST00000557529 ING3Q9NXR8 418 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 NDRG3Q9UGV2 375 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 ZNF230Q9UIE0 474 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-233ENST00000557529 ANXA10Q9UJ72 324 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 ERRFI1Q9UJM3 462 aaPredicted RBP10.59□□□□□ -0.71
SHMT2-233ENST00000557529 PRR14LQ5THK1 2151 aa10.59□□□□□ -0.71
SHMT2-233ENST00000557529 FAM90A27PA6NNH2 459 aa10.58□□□□□ -0.72
SHMT2-233ENST00000557529 DEGS1O15121 323 aa10.58□□□□□ -0.72
SHMT2-233ENST00000557529 SSNA1O43805 119 aa10.58□□□□□ -0.72
SHMT2-233ENST00000557529 CREBL2O60519 120 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-233ENST00000557529 PTBP3O95758 552 aaKnown RBP10.58□□□□□ -0.72
SHMT2-233ENST00000557529 ANXA7P20073 488 aaKnown RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms