RNA–Protein interactions for RNA: ENST00000557487.5

SHMT2-232, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 1 (best) BASIC

Gene SHMT2, Length 1,918 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-232ENST00000557487 PARP12Q9H0J9 701 aaKnown RBP14.16□□□□□ -0.14
SHMT2-232ENST00000557487 HIPK2Q9H2X6 1198 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 LIME1Q9H400 295 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 PLSCR2Q9NRY7 297 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 PLEK2Q9NYT0 353 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 RCL1Q9Y2P8 373 aaKnown RBP14.16□□□□□ -0.14
SHMT2-232ENST00000557487 FER1L5A0AVI2 2057 aa14.16□□□□□ -0.14
SHMT2-232ENST00000557487 hCG_1809904A0A1W2PP81 198 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 A0A1W2PR64 198 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 A0A1W2PRV1 198 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 NPIPA2E9PIF3 369 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 NPIPA3F8WFD2 350 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 WRBO00258 174 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 MSTNO14793 375 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 HSPA12AO43301 675 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 OR2C1O95371 312 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 DIRAS3O95661 229 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 OPN1LWP04000 364 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 TDGF1P13385 188 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 MMP9P14780 707 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 RBP2P50120 134 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 EWSR1Q01844 656 aaKnown RBP eCLIP14.15□□□□□ -0.14
SHMT2-232ENST00000557487 TAF9Q16594 264 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 SP6Q3SY56 376 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 TMEM211Q6ICI0 200 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 ADAM5Q6NVV9 412 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 HEPN1Q6WQI6 88 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 ZNF100Q8IYN0 542 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 OR14L1PQ8NHC6 308 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 TECTBQ96PL2 329 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 MESP1Q9BRJ9 268 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 GPR173Q9NS66 373 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 MIOXQ9UGB7 285 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 NXT1Q9UKK6 140 aaKnown RBP14.15□□□□□ -0.14
SHMT2-232ENST00000557487 FBXO7Q9Y3I1 522 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 DUXBA0A1W2PPF3 345 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 CXorf65A6NEN9 183 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 CLN5O75503 358 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 PNLIPP16233 465 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 CRYGSP22914 178 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 RAB2AP61019 212 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 HERV-K104P61576 105 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 DPPA3Q6W0C5 159 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 OR2C3Q8N628 320 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 LINC00469Q8N7U9 141 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 FAM213BQ8TBF2 198 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 BORCS8Q96FH0 119 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 RASL10BQ96S79 203 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 DEFB126Q9BYW3 111 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 C11orf1Q9H5F2 150 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 KIAA1456Q9P272 454 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 ZDHHC8Q9ULC8 765 aa14.15□□□□□ -0.14
SHMT2-232ENST00000557487 ADAMTS20P59510 1910 aa14.14□□□□□ -0.15
SHMT2-232ENST00000557487 XRCC2O43543 280 aa14.14□□□□□ -0.15
SHMT2-232ENST00000557487 IGHV2-70P01814 119 aa14.14□□□□□ -0.15
SHMT2-232ENST00000557487 FBP1P09467 338 aa14.14□□□□□ -0.15
SHMT2-232ENST00000557487 SP9P0CG40 484 aa14.14□□□□□ -0.15
SHMT2-232ENST00000557487 NQO2P16083 231 aa14.14□□□□□ -0.15
SHMT2-232ENST00000557487 RPS23P62266 143 aaKnown RBP14.14□□□□□ -0.15
SHMT2-232ENST00000557487 FAM209BQ5JX69 171 aa14.14□□□□□ -0.15
SHMT2-232ENST00000557487 TMEM42Q69YG0 159 aa14.14□□□□□ -0.15
SHMT2-232ENST00000557487 OSR2Q8N2R0 312 aa14.14□□□□□ -0.15
SHMT2-232ENST00000557487 HSD17B11Q8NBQ5 300 aa14.14□□□□□ -0.15
SHMT2-232ENST00000557487 OR52M1Q8NGK5 317 aa14.14□□□□□ -0.15
SHMT2-232ENST00000557487 GNPNAT1Q96EK6 184 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-232ENST00000557487 C20orf24Q9BUV8 137 aa14.14□□□□□ -0.15
SHMT2-232ENST00000557487 PLEKHF2Q9H8W4 249 aa14.14□□□□□ -0.15
SHMT2-232ENST00000557487 FOXD3Q9UJU5 478 aaPredicted RBP14.14□□□□□ -0.15
SHMT2-232ENST00000557487 PIGBOS1A0A0B4J2F0 54 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 FAM230AA0A1W2PPH8 454 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 RBFOX3A6NFN3 312 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 K7ESF4 209 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 PHF1O43189 567 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-232ENST00000557487 DNPH1O43598 174 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 HOXA5P20719 270 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 OPRM1P35372 400 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 SRSF7Q16629 238 aaKnown RBP eCLIP14.13□□□□□ -0.15
SHMT2-232ENST00000557487 SLC22A25Q6T423 547 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 TMEM182Q6ZP80 229 aaPredicted RBP14.13□□□□□ -0.15
SHMT2-232ENST00000557487 FBXL14Q8N1E6 418 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 REEP6Q96HR9 211 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 ULBP2Q9BZM5 246 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 SH3BGRL3Q9H299 93 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 SIRT7Q9NRC8 400 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 FAM86C1Q9NVL1 165 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 DMRT1Q9Y5R6 373 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 RALGAPA1Q6GYQ0 2036 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 KNL1Q8NG31 2342 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 A0A1W2PPE2 198 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 TRDCB7Z8K6 153 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 PPIHO43447 177 aaKnown RBP14.13□□□□□ -0.15
SHMT2-232ENST00000557487 PDCD6O75340 191 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 CD63P08962 238 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 DAOP14920 347 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 FHITP49789 147 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 RRADP55042 308 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 FXYD4P59646 89 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 RND3P61587 244 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 NHLH2Q02577 135 aa14.13□□□□□ -0.15
SHMT2-232ENST00000557487 BAXQ07812 192 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms