RNA–Protein interactions for RNA: ENST00000555612.5

SYNE2-220, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 6,766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-220ENST00000555612 RRASP10301 218 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 BCL3P20749 454 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 KIR2DS2P43631 304 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 BTG1P62324 171 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 KLRB1Q12918 225 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 ECSCRQ19T08 205 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 UQCC2Q9BRT2 126 aa7.25□□□□□ -1.25
SYNE2-220ENST00000555612 WNK3Q9BYP7 1800 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 LANCL1O43813 399 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 HOXD4P09016 255 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-220ENST00000555612 HTN1P15515 57 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 FNDC7Q5VTL7 733 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 OR52B4Q8NGK2 314 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 TMEM38BQ9NVV0 291 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 NUP205Q92621 2012 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 SHROOM3Q8TF72 1996 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 CASP8AP2Q9UKL3 1982 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 SEMA7AO75326 666 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 ZNF17P17021 662 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 CISD1Q9NZ45 108 aaKnown RBP7.24□□□□□ -1.25
SYNE2-220ENST00000555612 PPIAL4EA0A075B759 164 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 C9orf172C9J069 976 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 PPIAL4DF5H284 164 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 PPIAL4FP0DN26 164 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 EVX1P49640 407 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 GAMTQ14353 236 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 TGIF2LYQ8IUE0 185 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 TGIF2LXQ8IUE1 241 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 OR5H6Q8NGV6 325 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 ADAMTS17Q8TE56 1095 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 BLNKQ8WV28 456 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 YIPF6Q96EC8 236 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 FOXJ2Q9P0K8 574 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 GOLT1BQ9Y3E0 138 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 PPIAL4AQ9Y536 164 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 ZNF727A8MUV8 499 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 H7BYZ3 331 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 APELAP0DMC3 54 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 C19orf57Q0VDD7 668 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 BTNL8Q6UX41 500 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 SKA3Q8IX90 412 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 TMEM229BQ8NBD8 167 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 ZNF385AQ96PM9 386 aaKnown RBP7.24□□□□□ -1.25
SYNE2-220ENST00000555612 CLCF1Q9UBD9 225 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 MS4A18H0YCH9 400 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 ZNHIT1O43257 154 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 FGF5P12034 268 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 ATP5J2P56134 94 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 MS4A18Q3C1V0 323 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 ZNF528Q3MIS6 628 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 FAM214BQ7L5A3 538 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 OR5R1Q8NH85 324 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 BCL2L2Q92843 193 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-220ENST00000555612 OR2J1Q9GZK6 312 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.24□□□□□ -1.25
SYNE2-220ENST00000555612 MRPL22Q9NWU5 206 aaKnown RBP7.24□□□□□ -1.25
SYNE2-220ENST00000555612 FKBP11Q9NYL4 201 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 BOLA1Q9Y3E2 137 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 INSIG2Q9Y5U4 225 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 FER1L6Q2WGJ9 1857 aa7.24□□□□□ -1.25
SYNE2-220ENST00000555612 LSM6P62312 80 aaKnown RBP7.23□□□□□ -1.25
SYNE2-220ENST00000555612 BTN1A1Q13410 526 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 INSL4Q14641 139 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 MRGPRGQ86SM5 289 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 CADM3Q8N126 398 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 OIT3Q8WWZ8 545 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 CNTD2Q9H8S5 307 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 ATG2BQ96BY7 2078 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 APC2O95996 2303 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 A0A0J9YW62 118 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 ACSM4P0C7M7 580 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 LIMS3P0CW19 117 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 LIMS4P0CW20 117 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 CSF2RBP32927 897 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 TSPO2Q5TGU0 170 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 HGDQ93099 445 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 NEIL1Q96FI4 390 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-220ENST00000555612 NTN4Q9HB63 628 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 A0A0A6YYJ9 748 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 ARRDC1Q8N5I2 433 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 OR1L4Q8NGR5 311 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 OR10AC1Q8NH08 325 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 MARC2Q969Z3 335 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 SLC25A32Q9H2D1 315 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 PRR33A8MZF0 331 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 DCTN6O00399 190 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 ORM2P19652 201 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 RAB5CP51148 216 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 ASAH1Q13510 395 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 CDCP2Q5VXM1 449 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 DGAT2L6Q6ZPD8 337 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 WFDC3Q8IUB2 231 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 RXFP4Q8TDU9 374 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 DNASE2BQ8WZ79 361 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 SLC25A10Q9UBX3 287 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-220ENST00000555612 TMEFF2Q9UIK5 374 aaPredicted RBP7.23□□□□□ -1.25
SYNE2-220ENST00000555612 A0A1W2PQM1 296 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 HAX1O00165 279 aa7.23□□□□□ -1.25
SYNE2-220ENST00000555612 ANKRD34CP0C6C1 535 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms