RNA–Protein interactions for RNA: ENST00000555252.5

MTHFD1-210, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 1 (best)

Gene MTHFD1, Length 2,053 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-210ENST00000555252 SFTPDP35247 375 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 PNRC1Q12796 327 aaPredicted RBP9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 SSX2Q16385 188 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 LYSMD4Q5XG99 296 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 GUSBP11Q6P575 273 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 SLC25A47Q6Q0C1 308 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 ABHD12BQ7Z5M8 362 aaPredicted RBP9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 WDFY1Q8IWB7 410 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 LGI3Q8N145 548 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 FADS6Q8N9I5 356 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 OR10G3Q8NGC4 313 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 FAM213BQ8TBF2 198 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 C10orf35Q96D05 121 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 C18orf12Q96KH6 178 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 NOL4LQ96MY1 436 aaPredicted RBP9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 NIPSNAP3BQ9BS92 247 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 EMC6Q9BV81 110 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 PARP12Q9H0J9 701 aaKnown RBP9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 WDR54Q9H977 334 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 POLR1DQ9Y2S0 133 aa9.33□□□□□ -0.92
MTHFD1-210ENST00000555252 A0A087X0M5 115 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 A0A1B0GV90 55 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 A0A1B0GX30 115 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 FAM230AA0A1W2PPH8 454 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 A0A1W2PQM1 296 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 ZNF726A6NNF4 738 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 OR2J2O76002 312 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 SCGB1D2O95969 90 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 CD63P08962 238 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 ZNF43P17038 809 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 BTF3P20290 206 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 DTYMKP23919 212 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 PPP1CCP36873 323 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 RND2P52198 227 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 FOXL2P58012 376 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 GRB2P62993 217 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 SRPXP78539 464 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 GNMTQ14749 295 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 KHDC3LQ587J8 217 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 LIAT1Q6ZQX7 453 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 BEND2Q8NDZ0 799 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 OR8B12Q8NGG6 310 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 OR14L1PQ8NHC6 308 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 RNASEH2CQ8TDP1 164 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 RELTQ969Z4 430 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 GNPNAT1Q96EK6 184 aaPredicted RBP9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 CCDC74BQ96LY2 380 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 PIGQQ9BRB3 760 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 ANGPTL4Q9BY76 406 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 RYDENQ9NUL5 291 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 PPP1R14DQ9NXH3 145 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 DVL1O14640 695 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 TERTO14746 1132 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 TRAF3IP2O43734 574 aaPredicted RBP9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 DKK1O94907 266 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 CDS2O95674 445 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 RD3LP0DJH9 198 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 SERPINA2P20848 420 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 CTSSP25774 331 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 FHITP49789 147 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 UCP3P55916 312 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 GABREP78334 506 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 DLK1P80370 383 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 HIST3H3Q16695 136 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 TMEM176BQ3YBM2 270 aaPredicted RBP9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 LCN10Q6JVE6 187 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 MRPL14Q6P1L8 145 aaKnown RBP9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 SPSB3Q6PJ21 355 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 PLXDC2Q6UX71 529 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 FBXW12Q6X9E4 464 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 TMEM182Q6ZP80 229 aaPredicted RBP9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 Q6ZSR3 168 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 ZNF429Q86V71 674 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 C1orf87Q8N0U7 546 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 OR14K1Q8NGZ2 314 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 SAP25Q8TEE9 199 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 HLA-CQ95604 372 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 RASL10BQ96S79 203 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 SSX3Q99909 188 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 GPR84Q9NQS5 396 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 NECAP2Q9NVZ3 263 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 ANXA10Q9UJ72 324 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 PITPNC1Q9UKF7 332 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 HSF4Q9ULV5 492 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 MMP24Q9Y5R2 645 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 LHFPL6Q9Y693 200 aa9.32□□□□□ -0.92
MTHFD1-210ENST00000555252 LOC102723996A0A087X1L8 192 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 CCDC163A0A0D9SF12 145 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 LY6G6EA0A0G2JKS1 128 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 AQP7P3A6NL99 342 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 ZNF732B4DXR9 585 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 SHISA8B8ZZ34 492 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 RAMP1O60894 148 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 SCAF4O95104 1147 aaKnown RBP9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 LY86O95711 162 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 IGLV3-1P01715 115 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 CXCL1P09341 107 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 FGF5P12034 268 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 CEACAM1P13688 526 aa9.31□□□□□ -0.92
MTHFD1-210ENST00000555252 MMP9P14780 707 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms