RNA–Protein interactions for RNA: ENST00000554079.1

SIX4-202, Transcript of SIX homeobox 4, humanhuman

TSL 1 (best)

Gene SIX4, Length 2,003 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-202ENST00000554079 OR5AR1Q8NGP9 310 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 OR5H2Q8NGV7 314 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 OR6N2Q8NGY6 317 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 OR2T10Q8NGZ9 312 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 ZNF689Q96CS4 500 aaPredicted RBP8.35□□□□□ -1.07
SIX4-202ENST00000554079 SLC25A44Q96H78 314 aaPredicted RBP8.35□□□□□ -1.07
SIX4-202ENST00000554079 CYYR1Q96J86 154 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 ZNF681Q96N22 645 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 OR6C1Q96RD1 312 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 GPX7Q96SL4 187 aaPredicted RBP8.35□□□□□ -1.07
SIX4-202ENST00000554079 AIF1LQ9BQI0 150 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 HSPB9Q9BQS6 159 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 BET1LQ9NYM9 111 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 GNG13Q9P2W3 67 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 B4GALT6Q9UBX8 382 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 GPR34Q9UPC5 381 aa8.35□□□□□ -1.07
SIX4-202ENST00000554079 MRPS16Q9Y3D3 137 aaKnown RBP8.35□□□□□ -1.07
SIX4-202ENST00000554079 COL4A2P08572 1712 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 A0A0A6YYD4 124 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 IGHV1-69-2A0A0G2JMI3 117 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 A0A1W2PRS3 328 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 RNF212BA8MTL3 300 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 STC2O76061 302 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 CDS2O95674 445 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 MPLP40238 635 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 RBPJQ06330 500 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 ZNF266Q14584 549 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 CLEC12BQ2HXU8 276 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 LRRC73Q5JTD7 316 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 ERN2Q76MJ5 926 aaKnown RBP8.34□□□□□ -1.07
SIX4-202ENST00000554079 C20orf196Q8IYI0 205 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 REEP6Q96HR9 211 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 P2RX4Q99571 388 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 TXN2Q99757 166 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 CLEC5AQ9NY25 188 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 PXMP4Q9Y6I8 212 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 CACNA1CQ13936 2221 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 SNRNP200O75643 2136 aaKnown RBP8.34□□□□□ -1.07
SIX4-202ENST00000554079 CRYM-AS1A6NIL9 109 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 ZNF814B7Z6K7 855 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 COCHO43405 550 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 TBL1XO60907 577 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 CSTAP01040 98 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 VSIG8P0DPA2 414 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 SRP14P37108 136 aaKnown RBP8.34□□□□□ -1.07
SIX4-202ENST00000554079 RPS4XP62701 263 aaKnown RBP8.34□□□□□ -1.07
SIX4-202ENST00000554079 RPL23P62829 140 aaKnown RBP8.34□□□□□ -1.07
SIX4-202ENST00000554079 SLC17A1Q14916 467 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 VAMP3Q15836 100 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 SLC48A1Q6P1K1 146 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 DPY19L4Q7Z388 723 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 OR4S2Q8NH73 311 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 CPT1CQ8TCG5 803 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 PLD4Q96BZ4 506 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 PTPN18Q99952 460 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 ZNF703Q9H7S9 590 aaPredicted RBP8.34□□□□□ -1.07
SIX4-202ENST00000554079 ELOVL3Q9HB03 270 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 FBXO34Q9NWN3 711 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 PRSS50Q9UI38 385 aa8.34□□□□□ -1.07
SIX4-202ENST00000554079 IGLC7A0M8Q6 106 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 OR6C6A6NF89 314 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 GPR89AB7ZAQ6 455 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 CORTO00230 105 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 RAD51DO75771 328 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 CTSDP07339 412 aaPredicted RBP8.33□□□□□ -1.08
SIX4-202ENST00000554079 C8AP07357 584 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 JMJD7P0C870 316 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 GPR89BP0CG08 455 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 IL3RAP26951 378 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 TSPOP30536 169 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 SFTPDP35247 375 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 TM4SF4P48230 202 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 RTP5Q14D33 572 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 BSXQ3C1V8 233 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 TMEM41BQ5BJD5 291 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 ZNF468Q5VIY5 522 aaPredicted RBP8.33□□□□□ -1.08
SIX4-202ENST00000554079 HSD11B1LQ7Z5J1 315 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 NPAS4Q8IUM7 802 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 MCEMP1Q8IX19 187 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 TMEM171Q8WVE6 324 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 DDIT4LQ96D03 193 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 MACROD1Q9BQ69 325 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 NICN1Q9BSH3 213 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 OR51I2Q9H344 312 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 PLSCR4Q9NRQ2 329 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 FBXL7Q9UJT9 491 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 PLAGL1Q9UM63 463 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 PCNX3Q9H6A9 2034 aa8.33□□□□□ -1.08
SIX4-202ENST00000554079 IGHV2-26A0A0B4J1V2 119 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 IGSF23A1L1A6 192 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 METTL12A8MUP2 240 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 SDCBPO00560 298 aaPredicted RBP8.32□□□□□ -1.08
SIX4-202ENST00000554079 BCL6P41182 706 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 TAS2R30P59541 319 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 PLAC9Q5JTB6 97 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 FCRL6Q6DN72 434 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 NIT1Q86X76 327 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 CALHM1Q8IU99 346 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 C7orf61Q8IZ16 206 aa8.32□□□□□ -1.08
SIX4-202ENST00000554079 FAM3CQ92520 227 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms