RNA–Protein interactions for RNA: ENST00000553949.1

SHMT2-209, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-209ENST00000553949 CST11Q9H112 138 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 DNTTIP1Q9H147 329 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 ZNF665Q9H7R5 613 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 LIN7BQ9HAP6 207 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 PATZ1Q9HBE1 687 aaKnown RBP10.21□□□□□ -0.77
SHMT2-209ENST00000553949 MIOXQ9UGB7 285 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 GLS2Q9UI32 602 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 DAPK2Q9UIK4 370 aa10.21□□□□□ -0.77
SHMT2-209ENST00000553949 OTOGQ6ZRI0 2925 aa10.21□□□□□ -0.78
SHMT2-209ENST00000553949 A0A0B4J203 849 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 A0A1B0GW55 424 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 TMEM14DPA8MWL7 114 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 F5H0A9 414 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-209ENST00000553949 CRTAPO75718 401 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-209ENST00000553949 HAND1O96004 215 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 HEXAP06865 529 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 WNT2P09544 360 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 DUX4L2P0CJ85 424 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 DUX4L3P0CJ86 424 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 DUX4L4P0CJ87 422 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 DUX4L5P0CJ88 424 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 DUX4L6P0CJ89 424 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 DUX4L7P0CJ90 424 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 MGMTP16455 207 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 CPT2P23786 658 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 CAPZA1P52907 286 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 RBM11P57052 281 aaKnown RBP10.2□□□□□ -0.78
SHMT2-209ENST00000553949 QRFPP83859 136 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 IL13RA2Q14627 380 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 C2orf76Q3KRA6 126 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 PIGYQ3MUY2 71 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 NHLRC3Q5JS37 347 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 OR10K2Q6IF99 312 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 DUX4L9Q6RFH8 374 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-209ENST00000553949 NLRC3Q7RTR2 1065 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 SLC36A1Q7Z2H8 476 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 OR2W3Q7Z3T1 314 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 CROCCP3Q8IVE0 287 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 FAM216BQ8N7L0 139 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 OR51D1Q8NGF3 324 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 OR8B3Q8NGG8 313 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 KCNG3Q8TAE7 436 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 FAM46BQ96A09 425 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 SLC25A46Q96AG3 418 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 RAB39BQ96DA2 213 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 MRPS24Q96EL2 167 aaKnown RBP10.2□□□□□ -0.78
SHMT2-209ENST00000553949 NEIL1Q96FI4 390 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-209ENST00000553949 OR8B2Q96RD0 313 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 RBM38Q9H0Z9 239 aaKnown RBP10.2□□□□□ -0.78
SHMT2-209ENST00000553949 DCSTAMPQ9H295 470 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 KCNK15Q9H427 330 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 BANF2Q9H503 90 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 SEBOXQ9HB31 216 aaPredicted RBP10.2□□□□□ -0.78
SHMT2-209ENST00000553949 KAAG1Q9UBP8 84 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 CTSZQ9UBR2 303 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 DUX4Q9UBX2 424 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 ST3GAL6Q9Y274 331 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 MAB21L2Q9Y586 359 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 MYO9AB2RTY4 2548 aa10.2□□□□□ -0.78
SHMT2-209ENST00000553949 TEX15Q9BXT5 2789 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 CCDC160A6NGH7 325 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 H3BMQ9 156 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 SH2D1BO14796 132 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 SMAD7O15105 426 aaKnown RBP10.19□□□□□ -0.78
SHMT2-209ENST00000553949 LDLRAD4O15165 306 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 SIGLEC5O15389 551 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 MPIG6BO95866 241 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 OR2H2O95918 312 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 CHRM2P08172 466 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 PITPNBP48739 271 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 SEC61A1P61619 476 aaKnown RBP10.19□□□□□ -0.78
SHMT2-209ENST00000553949 IL13RA1P78552 427 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 COL10A1Q03692 680 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 IKZF1Q13422 519 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 UNC119Q13432 240 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 SPCS2Q15005 226 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 IDNKQ5T6J7 187 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 Q6P435 159 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 ZNF841Q6ZN19 808 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 ZNF561Q8N587 486 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 MED30Q96HR3 178 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 SELENOIQ9C0D9 397 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 FBLN5Q9UBX5 448 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 METRNQ9UJH8 293 aa10.19□□□□□ -0.78
SHMT2-209ENST00000553949 MAP1AP78559 2803 aaPredicted RBP10.19□□□□□ -0.78
SHMT2-209ENST00000553949 TMEM272A0A1B0GTI8 110 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 SMIM31A0A1B0GVY4 71 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 DPPA5A6NC42 116 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 DVL1O14640 695 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 GEMIN2O14893 280 aaKnown RBP10.18□□□□□ -0.78
SHMT2-209ENST00000553949 DEGS1O15121 323 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 NDUFB3O43676 98 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 TMEM127O75204 238 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 SELLP14151 372 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 RPS27AP62979 156 aaKnown RBP10.18□□□□□ -0.78
SHMT2-209ENST00000553949 SCN1BQ07699 218 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 PDCD1Q15116 288 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 TAF9Q16594 264 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 MPV17LQ2QL34 196 aa10.18□□□□□ -0.78
SHMT2-209ENST00000553949 ESCO2Q56NI9 601 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms