RNA–Protein interactions for RNA: ENST00000553840.5

FOXN3-204, Transcript of forkhead box N3, humanhuman

TSL 4

Gene FOXN3, Length 555 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-204ENST00000553840 DTX3Q8N9I9 347 aa14.42□□□□□ -0.1
FOXN3-204ENST00000553840 HAVCR2Q8TDQ0 301 aa14.42□□□□□ -0.1
FOXN3-204ENST00000553840 RNF166Q96A37 237 aaPredicted RBP14.42□□□□□ -0.1
FOXN3-204ENST00000553840 PPA2Q9H2U2 334 aa14.42□□□□□ -0.1
FOXN3-204ENST00000553840 AASSQ9UDR5 926 aa14.42□□□□□ -0.1
FOXN3-204ENST00000553840 PCDHGB5Q9Y5G0 923 aa14.42□□□□□ -0.1
FOXN3-204ENST00000553840 IGKV1-9A0A0C4DH69 117 aa14.41□□□□□ -0.1
FOXN3-204ENST00000553840 PRKACAP17612 351 aa14.41□□□□□ -0.1
FOXN3-204ENST00000553840 GABRB1P18505 474 aa14.41□□□□□ -0.1
FOXN3-204ENST00000553840 GABRR1P24046 479 aa14.41□□□□□ -0.1
FOXN3-204ENST00000553840 SRSF4Q08170 494 aaKnown RBP14.41□□□□□ -0.1
FOXN3-204ENST00000553840 PDZK1IP1Q13113 114 aa14.41□□□□□ -0.1
FOXN3-204ENST00000553840 EDDM3AQ14507 147 aa14.41□□□□□ -0.1
FOXN3-204ENST00000553840 GRK1Q15835 563 aa14.41□□□□□ -0.1
FOXN3-204ENST00000553840 KLHL22Q53GT1 634 aa14.41□□□□□ -0.1
FOXN3-204ENST00000553840 ZNF782Q6ZMW2 699 aaPredicted RBP14.41□□□□□ -0.1
FOXN3-204ENST00000553840 ZNF555Q8NEP9 628 aa14.41□□□□□ -0.1
FOXN3-204ENST00000553840 RHOXF1Q8NHV9 184 aa14.41□□□□□ -0.1
FOXN3-204ENST00000553840 ZNF714Q96N38 554 aa14.41□□□□□ -0.1
FOXN3-204ENST00000553840 SLC29A1Q99808 456 aa14.41□□□□□ -0.1
FOXN3-204ENST00000553840 COMMD4Q9H0A8 199 aa14.41□□□□□ -0.1
FOXN3-204ENST00000553840 RBFOX1Q9NWB1 397 aaKnown RBP14.41□□□□□ -0.1
FOXN3-204ENST00000553840 RPL36Q9Y3U8 105 aaKnown RBP14.41□□□□□ -0.1
FOXN3-204ENST00000553840 OR4C45A6NMZ5 311 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 SH2D1BO14796 132 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 CCDC159P0C7I6 412 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 BCL3P20749 454 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 NPBWR2P48146 333 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 BMXP51813 675 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 GBX2P52951 348 aaPredicted RBP14.4□□□□□ -0.1
FOXN3-204ENST00000553840 PROK1P58294 105 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 RCN1Q15293 331 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 LY6EQ16553 131 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 LIAT1Q6ZQX7 453 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 OR5D14Q8NGL3 314 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 OR13C9Q8NGT0 318 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 C17orf50Q8WW18 174 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 RHOFQ9HBH0 211 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 TCF7L1Q9HCS4 588 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 AMBNQ9NP70 447 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 FAM118AQ9NWS6 357 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 ERVK13-1Q9NX77 482 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 MYRFQ9Y2G1 1151 aa14.4□□□□□ -0.1
FOXN3-204ENST00000553840 TBL2Q9Y4P3 447 aaKnown RBP14.4□□□□□ -0.1
FOXN3-204ENST00000553840 TMEM82A0PJX8 343 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 FUOMA2VDF0 154 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 TMEM212A6NML5 194 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 MGST3O14880 152 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 IGHA1P01876 353 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 MT-ND2P03891 347 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 ARG1P05089 322 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 DLX6P56179 175 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 ZNF146Q15072 292 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 SLC35E4Q6ICL7 350 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 SERPINA12Q8IW75 414 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 OR51A4Q8NGJ6 313 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 OR4C13Q8NGP0 309 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 OR10AC1Q8NH08 325 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 OR5AK2Q8NH90 309 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 FOXRED1Q96CU9 486 aaPredicted RBP14.39□□□□□ -0.11
FOXN3-204ENST00000553840 MALSU1Q96EH3 234 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 CPNE2Q96FN4 548 aaPredicted RBP14.39□□□□□ -0.11
FOXN3-204ENST00000553840 RDH12Q96NR8 316 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 ZCCHC4Q9H5U6 513 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 HMG20AQ9NP66 347 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 EXOSC4Q9NPD3 245 aaKnown RBP14.39□□□□□ -0.11
FOXN3-204ENST00000553840 FBLN5Q9UBX5 448 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 LINC00312Q9Y6C7 94 aa14.39□□□□□ -0.11
FOXN3-204ENST00000553840 HCKP08631 526 aa14.38□□□□□ -0.11
FOXN3-204ENST00000553840 IGHV1-8P0DP01 117 aa14.38□□□□□ -0.11
FOXN3-204ENST00000553840 DUSP1P28562 367 aa14.38□□□□□ -0.11
FOXN3-204ENST00000553840 GABRA5P31644 462 aa14.38□□□□□ -0.11
FOXN3-204ENST00000553840 SNU13P55769 128 aaKnown RBP14.38□□□□□ -0.11
FOXN3-204ENST00000553840 C11orf88Q6PI97 169 aa14.38□□□□□ -0.11
FOXN3-204ENST00000553840 TRAPPC6BQ86SZ2 158 aa14.38□□□□□ -0.11
FOXN3-204ENST00000553840 SAXO1Q8IYX7 474 aa14.38□□□□□ -0.11
FOXN3-204ENST00000553840 OR11H6Q8NGC7 330 aa14.38□□□□□ -0.11
FOXN3-204ENST00000553840 TSEN15Q8WW01 171 aaKnown RBP14.38□□□□□ -0.11
FOXN3-204ENST00000553840 RFT1Q96AA3 541 aa14.38□□□□□ -0.11
FOXN3-204ENST00000553840 AJUBAQ96IF1 538 aa14.38□□□□□ -0.11
FOXN3-204ENST00000553840 CHST6Q9GZX3 395 aa14.38□□□□□ -0.11
FOXN3-204ENST00000553840 ISG20L2Q9H9L3 353 aaKnown RBP14.38□□□□□ -0.11
FOXN3-204ENST00000553840 ABCB10Q9NRK6 738 aa14.38□□□□□ -0.11
FOXN3-204ENST00000553840 SMPD3Q9NY59 655 aaPredicted RBP14.38□□□□□ -0.11
FOXN3-204ENST00000553840 DHDHQ9UQ10 334 aa14.38□□□□□ -0.11
FOXN3-204ENST00000553840 GSTK1Q9Y2Q3 226 aa14.38□□□□□ -0.11
FOXN3-204ENST00000553840 KDM4BO94953 1096 aa14.37□□□□□ -0.11
FOXN3-204ENST00000553840 ALX3O95076 343 aa14.37□□□□□ -0.11
FOXN3-204ENST00000553840 CALCBP10092 127 aa14.37□□□□□ -0.11
FOXN3-204ENST00000553840 ERP29P30040 261 aaKnown RBP14.37□□□□□ -0.11
FOXN3-204ENST00000553840 DYNC1I2Q13409 638 aaKnown RBP14.37□□□□□ -0.11
FOXN3-204ENST00000553840 OR52N4Q8NGI2 321 aa14.37□□□□□ -0.11
FOXN3-204ENST00000553840 OR52I1Q8NGK6 324 aa14.37□□□□□ -0.11
FOXN3-204ENST00000553840 NPFFR1Q9GZQ6 430 aa14.37□□□□□ -0.11
FOXN3-204ENST00000553840 MMP27Q9H306 513 aa14.37□□□□□ -0.11
FOXN3-204ENST00000553840 RANBP3Q9H6Z4 567 aaPredicted RBP14.37□□□□□ -0.11
FOXN3-204ENST00000553840 MRPS18AQ9NVS2 196 aaKnown RBP14.37□□□□□ -0.11
FOXN3-204ENST00000553840 IL36RNQ9UBH0 155 aa14.37□□□□□ -0.11
FOXN3-204ENST00000553840 UBE2J1Q9Y385 318 aaPredicted RBP14.37□□□□□ -0.11
FOXN3-204ENST00000553840 MGAM2Q2M2H8 2515 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 132.7 ms