RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 SELLP14151 372 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 FASP25445 335 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 S100A3P33764 101 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 KIR3DL2P43630 455 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 CAPZA1P52907 286 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 F2RL1P55085 397 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 DSTNP60981 165 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 RPL31P62899 125 aaKnown RBP4.46□□□□□ -1.7
ATXN3-223ENST00000553686 RPL24P83731 157 aaKnown RBP4.46□□□□□ -1.7
ATXN3-223ENST00000553686 EMX2Q04743 252 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 GABPB1Q06547 395 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-223ENST00000553686 RPL18Q07020 188 aaKnown RBP4.46□□□□□ -1.7
ATXN3-223ENST00000553686 GAGE5Q13069 117 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 GAGE6Q13070 117 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 MAPK11Q15759 364 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 SNAPC1Q16533 368 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 KRTAP5-11Q6L8G4 156 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 C8orf74Q6P047 294 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 ZNF613Q6PF04 617 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 OR11H1Q8NG94 326 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 OR11H6Q8NGC7 330 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 OR8S1Q8NH09 359 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 OR52I2Q8NH67 350 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 ACMSDQ8TDX5 336 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 C4orf3Q8WVX3 66 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 TESCQ96BS2 214 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 MPP4Q96JB8 637 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 GAFA1Q96PS6 74 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 RAB3IPQ96QF0 476 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-223ENST00000553686 BCL2L10Q9HD36 194 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 RANGRFQ9HD47 186 aaPredicted RBP4.46□□□□□ -1.7
ATXN3-223ENST00000553686 SCRT2Q9NQ03 307 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 DNAJB9Q9UBS3 223 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 GIMAP2Q9UG22 337 aa4.46□□□□□ -1.7
ATXN3-223ENST00000553686 UTP11Q9Y3A2 253 aaKnown RBP4.46□□□□□ -1.7
ATXN3-223ENST00000553686 IGLV5-45A0A087WSX0 123 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 PRORSD1PA6NEY8 169 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 A6NIZ1 184 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 C5orf58C9J3I9 102 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 J3KRW8 73 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 CHP2O43745 196 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 CNIH1O95406 144 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 IGHV1-8P0DP01 117 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 CPA3P15088 417 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 FUT1P19526 365 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 AQP2P41181 271 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 GABRA2P47869 451 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 CLNS1AP54105 237 aaKnown RBP4.45□□□□□ -1.7
ATXN3-223ENST00000553686 RGS8P57771 180 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-223ENST00000553686 RAP1BP61224 184 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 RPL27P61353 136 aaKnown RBP4.45□□□□□ -1.7
ATXN3-223ENST00000553686 LSM6P62312 80 aaKnown RBP4.45□□□□□ -1.7
ATXN3-223ENST00000553686 RAP1AP62834 184 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 LCN8Q6JVE9 175 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 NANOGP8Q6NSW7 305 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 DHRS4L2Q6PKH6 230 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 WDR82Q6UXN9 313 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 ACP7Q6ZNF0 438 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 CFAP77Q6ZQR2 320 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 TSEN54Q7Z6J9 526 aaKnown RBP4.45□□□□□ -1.7
ATXN3-223ENST00000553686 CYB561A3Q8NBI2 242 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 TMEM116Q8NCL8 245 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 TMEM185AQ8NFB2 350 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 OR1N2Q8NGR9 330 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 ANGPTL6Q8NI99 470 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 SEH1LQ96EE3 360 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 ST6GAL2Q96JF0 529 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 NOL4LQ96MY1 436 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-223ENST00000553686 OR4C12Q96R67 309 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 COQ7Q99807 217 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 NABP2Q9BQ15 211 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 TMED9Q9BVK6 235 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 FUT8Q9BYC5 575 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 HDHD2Q9H0R4 259 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 C1orf21Q9H246 121 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 ANGPT4Q9Y264 503 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 DNAH11Q96DT5 4516 aa4.45□□□□□ -1.7
ATXN3-223ENST00000553686 OR2AT4A6NND4 320 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 ANKRD30BLA7E2S9 258 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-223ENST00000553686 CDIPTO14735 213 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 RER1O15258 196 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 CDK2AP2O75956 126 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 BRI3O95415 125 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 RBP4P02753 201 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 CD24P25063 80 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 HTR1DP28221 377 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 DDOSTP39656 456 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 GMFBP60983 142 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 ZNF616Q08AN1 781 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 GPR50Q13585 617 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 CCDC153Q494R4 210 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 CCDC92Q53HC0 331 aaPredicted RBP4.44□□□□□ -1.7
ATXN3-223ENST00000553686 SPANXN4Q5MJ08 99 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 ZBTB49Q6ZSB9 765 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 SLC35E3Q7Z769 313 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 C11orf53Q8IXP5 236 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 PGAM4Q8N0Y7 254 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 STPG2Q8N412 459 aa4.44□□□□□ -1.7
ATXN3-223ENST00000553686 CCDC63Q8NA47 563 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms