RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 FAHP16930 419 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 ACKR3P25106 362 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 NFYBP25208 207 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 UCP1P25874 307 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 CDAP32320 146 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 SFTPDP35247 375 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 CAMLGP49069 296 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 RBP2P50120 134 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 SULT1A1P50225 295 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 PPT1P50897 306 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 AFF3P51826 1226 aaKnown RBP4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 DSCR4P56555 118 aaPredicted RBP4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 CLDN17P56750 224 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 EWSR1Q01844 656 aaKnown RBP eCLIP4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 FOXO1Q12778 655 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 GNMTQ14749 295 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 RNPS1Q15287 305 aaKnown RBP4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 SMAD2Q15796 467 aaKnown RBP4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 HYAL4Q2M3T9 481 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 RSPO1Q2MKA7 263 aaPredicted RBP4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 ABCA11PQ4W5N1 156 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 HIKESHIQ53FT3 197 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 TRIM61Q5EBN2 209 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 C1orf189Q5VU69 101 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 TMEM211Q6ICI0 200 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 VHLLQ6RSH7 139 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 HEPN1Q6WQI6 88 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 FBXW12Q6X9E4 464 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 C6orf201Q7Z4U5 140 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 C1QL2Q7Z5L3 287 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 C20orf196Q8IYI0 205 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 PRSS58Q8IYP2 241 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 SAXO1Q8IYX7 474 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 LILRB2Q8N423 598 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 WDSUB1Q8N9V3 476 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 OR13D1Q8NGV5 346 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 CPT1CQ8TCG5 803 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 SECTM1Q8WVN6 248 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 TCTEX1D2Q8WW35 142 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 GTF3AQ92664 365 aaKnown RBP4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 ERGIC1Q969X5 290 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 SPSB4Q96A44 273 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 RBMXL1Q96E39 390 aaKnown RBP4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 RASL10BQ96S79 203 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 PIGQQ9BRB3 760 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 NUDT22Q9BRQ3 303 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 SOX7Q9BT81 388 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 SLC25A31Q9H0C2 315 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 DUSP15Q9H1R2 295 aaPredicted RBP4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 TMPRSS5Q9H3S3 457 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 SH2D2AQ9NP31 389 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 KCNJ16Q9NPI9 418 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 RPS10P5Q9NQ39 176 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 FAM86C1Q9NVL1 165 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 CRIM1Q9NZV1 1036 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 AK3Q9UIJ7 227 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 DKKL1Q9UK85 242 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 PIGLQ9Y2B2 252 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 RCL1Q9Y2P8 373 aaKnown RBP4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 MRPS17Q9Y2R5 130 aaKnown RBP4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 NCOR1O75376 2440 aa4.56□□□□□ -1.68
TMEM55B-204ENST00000553602 SPTBP11277 2137 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 ATG2BQ96BY7 2078 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 PHF3Q92576 2039 aaKnown RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 TRBV6-6A0A0A6YYG2 114 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 IGHV3-20A0A0C4DH32 117 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 hCG_38984A0A1B0GV85 526 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 FAM230AA0A1W2PPH8 454 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 LRP5LA4QPB2 252 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 E9PLN8 166 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 NPIPA3F8WFD2 350 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 WRBO00258 174 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 HSPA12AO43301 675 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 XRCC2O43543 280 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 SGCEO43556 437 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 GATCO43716 136 aaKnown RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 RAMP1O60894 148 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 SCRG1O75711 98 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 IFNA17P01571 189 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 FABP1P07148 127 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 CTXN2P0C2S0 81 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 OR8U8P0C7N1 319 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 TMEM225BP0DP42 221 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 ZNF14P17017 642 aaPredicted RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 EN2P19622 333 aaPredicted RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 TCN2P20062 427 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 ANOS1P23352 680 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 EIF2S3P41091 472 aaKnown RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 MTCP1P56278 107 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 RBM11P57052 281 aaKnown RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 PCBD1P61457 104 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 HERV-K104P61576 105 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 SNRPEP62304 92 aaKnown RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 ZNF616Q08AN1 781 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 PNRC1Q12796 327 aaPredicted RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 MALLQ13021 153 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 PMS2P11Q13670 270 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 TMEM176BQ3YBM2 270 aaPredicted RBP4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 ZNF506Q5JVG8 444 aa4.55□□□□□ -1.68
TMEM55B-204ENST00000553602 LCE2AQ5TA79 106 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms