RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 Q6ZR03 302 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 PLEKHG7Q6ZR37 379 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 LHFPL3Q86UP9 236 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 GID4Q8IVV7 300 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 PARP8Q8N3A8 854 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 DHRSXQ8N5I4 330 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 C19orf18Q8NEA5 215 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 OR8J1Q8NGP2 316 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 OR11L1Q8NGX0 322 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 OTOSQ8NHW6 89 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF420Q8TAQ5 688 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-220ENST00000553491 ST7LQ8TDW4 575 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 TMED6Q8WW62 240 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 ASB17Q8WXJ9 295 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 FAM71F1Q96KD3 344 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-220ENST00000553491 LYZL4Q96KX0 146 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 Q96MT0 163 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 OR2V2Q96R30 315 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 BPESC1Q9GZL8 116 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 KCNK15Q9H427 330 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 MYOZ1Q9NP98 299 aaPredicted RBP3.92□□□□□ -1.78
ATXN3-220ENST00000553491 TUBG2Q9NRH3 451 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 FAM118AQ9NWS6 357 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 WARS2Q9UGM6 360 aaKnown RBP3.92□□□□□ -1.78
ATXN3-220ENST00000553491 GNG8Q9UK08 70 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 KLHDC2Q9Y2U9 406 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 TMEM14AQ9Y6G1 99 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 CELSR1Q9NYQ6 3014 aa3.92□□□□□ -1.78
ATXN3-220ENST00000553491 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.92□□□□□ -1.784e-12■■■□□ 18.3
ATXN3-220ENST00000553491 ABCA2Q9BZC7 2435 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 IGHV4-61A0A0C4DH41 118 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 A0A1W2PQL4 384 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-220ENST00000553491 CCDC182A6NF36 153 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 METTL15A6NJ78 407 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 LRRC30A6NM36 301 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF850A8MQ14 1090 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 IQCF6A8MYZ5 107 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 LOC110117498-PIK3R3F6TDL0 507 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 J3QR06 171 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 NDUFS8O00217 210 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 P2RY10O00398 339 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 PHYHO14832 338 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 ATP6V1G2O95670 118 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 CLIC3O95833 236 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 PRSS2P07478 247 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 TACSTD2P09758 323 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 OR2T7P0C7T2 308 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 OCM2P0CE71 109 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 OCMP0CE72 109 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-220ENST00000553491 ALOX5APP20292 161 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 KITLGP21583 273 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 ACHEP22303 614 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 HTR1FP30939 366 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 IL2RGP31785 369 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 SLC3A1Q07837 685 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 LOXL1Q08397 574 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-220ENST00000553491 MZT1Q08AG7 82 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 UBE2V1Q13404 147 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 OR8B8Q15620 311 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 TMEM249Q2WGJ8 235 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF829Q3KNS6 432 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-220ENST00000553491 TP53I3Q53FA7 332 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 KLHL22Q53GT1 634 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 TMEM255AQ5JRV8 349 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 BCL2L15Q5TBC7 163 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 AADACL4Q5VUY2 407 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 PRAMEF6Q5VXH4 476 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 RUSC1-AS1Q66K80 236 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 FAHD2BQ6P2I3 314 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-220ENST00000553491 CSPG4Q6UVK1 2322 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 FBXW12Q6X9E4 464 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 IL17RELQ6ZVW7 336 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 FAM220AQ7Z4H9 259 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 ZNF679Q8IYX0 411 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 OR56B2PQ8NGI1 322 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 OR52H1Q8NGJ2 320 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 OR2T27Q8NH04 317 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 OR51E1Q8TCB6 317 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 RNF133Q8WVZ7 376 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 TRUB1Q8WWH5 349 aaKnown RBP3.91□□□□□ -1.78
ATXN3-220ENST00000553491 FAHD2AQ96GK7 314 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 RNF170Q96K19 258 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 MBOAT4Q96T53 435 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 GAL3ST1Q99999 423 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 PAPOLGQ9BWT3 736 aaKnown RBP3.91□□□□□ -1.78
ATXN3-220ENST00000553491 BEX2Q9BXY8 128 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 GABARAPL3Q9BY60 117 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 PBOV1Q9GZY1 135 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 MMP27Q9H306 513 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 VCXQ9H320 206 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 DCLRE1BQ9H816 532 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 NIPAL2Q9H841 368 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 MARCH7Q9H992 704 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 ADGRL4Q9HBW9 690 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 C1orf123Q9NWV4 160 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 SMPD3Q9NY59 655 aaPredicted RBP3.91□□□□□ -1.78
ATXN3-220ENST00000553491 USE1Q9NZ43 259 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 IL19Q9UHD0 177 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 ATPIF1Q9UII2 106 aa3.91□□□□□ -1.78
ATXN3-220ENST00000553491 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms