RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 LHFPL2Q6ZUX7 228 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 TRAPPC6BQ86SZ2 158 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 RDH10Q8IZV5 341 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 ZNF676Q8N7Q3 588 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 C11orf44Q8N8P7 122 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 NDNFQ8TB73 568 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 FAM53CQ9NYF3 392 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 TCF19Q9Y242 345 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 LINC00312Q9Y6C7 94 aa10.32□□□□□ -0.76
LINC00643-202ENST00000553426 KMT2CQ8NEZ4 4911 aaKnown RBP10.32□□□□□ -0.76
LINC00643-202ENST00000553426 A0A0G2JK05 382 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 TRBV2A0A0J9YWF9 115 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 MEX3AA1L020 520 aaKnown RBP10.31□□□□□ -0.76
LINC00643-202ENST00000553426 FUOMA2VDF0 154 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 F2RL2O00254 374 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 MGST3O14880 152 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 OPN1MWP04001 364 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 ALDOBP05062 364 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 HTR1AP08908 422 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 OPN1MW2P0DN77 364 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 OPN1MW3P0DN78 364 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 PRKACAP17612 351 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 ATF1P18846 271 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 AZGP1P25311 298 aaKnown RBP10.31□□□□□ -0.76
LINC00643-202ENST00000553426 RAB13P51153 203 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 ACTA2P62736 377 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 ACTG2P63267 376 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 ZNF85Q03923 595 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 EMX1Q04741 257 aaPredicted RBP10.31□□□□□ -0.76
LINC00643-202ENST00000553426 ZNF91Q05481 1191 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 SLC34A1Q06495 639 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 IL18R1Q13478 541 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 MINOS1Q5TGZ0 78 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 UTS2BQ765I0 119 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 C1QL4Q86Z23 238 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 OR2G2Q8NGZ5 317 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 PIFOQ8TCI5 191 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 CFHR4Q92496 578 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 SPSB1Q96BD6 273 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 RNFT2Q96EX2 444 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 PRSS22Q9GZN4 317 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 CHST6Q9GZX3 395 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 RBFOX1Q9NWB1 397 aaKnown RBP10.31□□□□□ -0.76
LINC00643-202ENST00000553426 HHLA2Q9UM44 414 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 SESN1Q9Y6P5 492 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 MINOS1-NBL1R4GNA1 71 aa10.31□□□□□ -0.76
LINC00643-202ENST00000553426 TMEM82A0PJX8 343 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 SH2D1BO14796 132 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 SLC16A6O15403 523 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 FBXO24O75426 580 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 ISG15P05161 165 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 RPSAP08865 295 aaKnown RBP10.3□□□□□ -0.76
LINC00643-202ENST00000553426 BCL3P20749 454 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 ERP29P30040 261 aaKnown RBP10.3□□□□□ -0.76
LINC00643-202ENST00000553426 KIR3DL2P43630 455 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 DYNLT3P51808 116 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 ARHGDIBP52566 201 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 ISL1P61371 349 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 ZNF146Q15072 292 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 OR52W1Q6IF63 320 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 DYNAPQ8N1N2 210 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 ACBD7Q8N6N7 88 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 OR4S1Q8NGB4 309 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 FGGYQ96C11 551 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 ADAT3Q96EY9 351 aaPredicted RBP10.3□□□□□ -0.76
LINC00643-202ENST00000553426 HRASLS5Q96KN8 279 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 OPALINQ96PE5 141 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 CLEC7AQ9BXN2 247 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 TMEM133Q9H2Q1 129 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 GAL3ST2Q9H3Q3 398 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 EXOSC4Q9NPD3 245 aaKnown RBP10.3□□□□□ -0.76
LINC00643-202ENST00000553426 UBE2J1Q9Y385 318 aaPredicted RBP10.3□□□□□ -0.76
LINC00643-202ENST00000553426 HILPDAQ9Y5L2 63 aa10.3□□□□□ -0.76
LINC00643-202ENST00000553426 TRGV10A0A0A0MS01 117 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 IGHV2-26A0A0B4J1V2 119 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 A6NDX4 124 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 XPNPEP2O43895 674 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 ENTPD6O75354 484 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 IGHA1P01876 353 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 DUSP1P28562 367 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 NPBWR2P48146 333 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 CCR9P51686 369 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 SNU13P55769 128 aaKnown RBP10.29□□□□□ -0.76
LINC00643-202ENST00000553426 SNRPGP62308 76 aaKnown RBP10.29□□□□□ -0.76
LINC00643-202ENST00000553426 PDZK1IP1Q13113 114 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 SLC25A30Q5SVS4 291 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 FDX2Q6P4F2 183 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 TMEM219Q86XT9 240 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 C10orf67Q8IYJ2 551 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 TPRX1Q8N7U7 411 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 OR52N4Q8NGI2 321 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 OR13C3Q8NGS6 347 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 CAPSLQ8WWF8 208 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 PYDC1Q8WXC3 89 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 AKR1E2Q96JD6 320 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 MBOAT4Q96T53 435 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 ZNF702PQ9H963 129 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 RHOFQ9HBH0 211 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 HMG20AQ9NP66 347 aa10.29□□□□□ -0.76
LINC00643-202ENST00000553426 FRRS1LQ9P0K9 344 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms