RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 H3BSH0 61 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 MAGEB4O15481 346 aaPredicted RBP7.18□□□□□ -1.26
SYNE2-209ENST00000553308 ZNF254O75437 659 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 IGLV1-47P01700 117 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 SNRNP70P08621 437 aaKnown RBP7.18□□□□□ -1.26
SYNE2-209ENST00000553308 CALCBP10092 127 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 PEX2P28328 305 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 DUSP1P28562 367 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 OR3A1P47881 315 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 ARHGDIBP52566 201 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 SNU13P55769 128 aaKnown RBP7.18□□□□□ -1.26
SYNE2-209ENST00000553308 RAB25P57735 213 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 CDK5Q00535 292 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 ZNF91Q05481 1191 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 UTF1Q5T230 341 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 CASC10Q5T4H9 136 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 TPTE2P1Q5T6R2 138 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 BCL2L15Q5TBC7 163 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 TMEM236Q5W0B7 351 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 SLC25A26Q70HW3 274 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 TMEM179BQ7Z7N9 219 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 EGFL6Q8IUX8 553 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 ELMOD2Q8IZ81 293 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 ZNF596Q8TC21 504 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 EMG1Q92979 244 aaKnown RBP7.18□□□□□ -1.26
SYNE2-209ENST00000553308 APOL4Q9BPW4 351 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 MOB1AQ9H8S9 216 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 ZNF286AQ9HBT8 521 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 PAPOLBQ9NRJ5 636 aaKnown RBP7.18□□□□□ -1.26
SYNE2-209ENST00000553308 ARL8BQ9NVJ2 186 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 RBFOX1Q9NWB1 397 aaKnown RBP7.18□□□□□ -1.26
SYNE2-209ENST00000553308 LINC00527Q9UJ94 153 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 OR52A1Q9UKL2 312 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 MOB4Q9Y3A3 225 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 HSPE1-MOB4S4R3N1 261 aa7.18□□□□□ -1.26
SYNE2-209ENST00000553308 ARRDC5A6NEK1 342 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 DHRS7CA6NNS2 312 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 BUB1B-PAK6H3BSN5 160 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 M0QZK8 103 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 MGST3O14880 152 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 RAMP3O60896 148 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 HMGN1P05114 100 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 CDK2P24941 298 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 CD34P28906 385 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 P2RX3P56373 397 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 RBM39Q14498 530 aaKnown RBP7.17□□□□□ -1.26
SYNE2-209ENST00000553308 UBE2V2Q15819 145 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 ODF4Q2M2E3 257 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 HLA-DRB5Q30154 266 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 FAM98BQ52LJ0 330 aaKnown RBP7.17□□□□□ -1.26
SYNE2-209ENST00000553308 KLHL22Q53GT1 634 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 SLX4IPQ5VYV7 408 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 OR52W1Q6IF63 320 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 C16orf89Q6UX73 402 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 Q6ZSR3 168 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 RTN4RL2Q86UN3 420 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 MUC7Q8TAX7 377 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 ASB17Q8WXJ9 295 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 RAX2Q96IS3 184 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 FAM107BQ9H098 131 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 GAL3ST2Q9H3Q3 398 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 ZMAT5Q9UDW3 170 aaKnown RBP7.17□□□□□ -1.26
SYNE2-209ENST00000553308 TAGLN3Q9UI15 199 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 SLC7A11Q9UPY5 501 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 UBE2J1Q9Y385 318 aaPredicted RBP7.17□□□□□ -1.26
SYNE2-209ENST00000553308 R4GMQ9 66 aa7.17□□□□□ -1.26
SYNE2-209ENST00000553308 TRGV10A0A0A0MS01 117 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 LY6LH3BQJ8 138 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 SIRPB1O00241 398 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 ENTPD6O75354 484 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 ZFPL1O95159 310 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 OSMP13725 252 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 BCL3P20749 454 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 CCL1P22362 96 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 ERP29P30040 261 aaKnown RBP7.16□□□□□ -1.26
SYNE2-209ENST00000553308 SLC6A1P30531 599 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 CEACAM3P40198 252 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 MNDAP41218 407 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 ECI1P42126 302 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 GLIPR1P48060 266 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 NPBWR2P48146 333 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 CXCR4P61073 352 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 DEFB136Q30KP8 78 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 SPATS1Q496A3 300 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 ZNF322Q6U7Q0 402 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-209ENST00000553308 HEPN1Q6WQI6 88 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 DHFR2Q86XF0 187 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 ZNF695Q8IW36 515 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 HS3ST5Q8IZT8 346 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 C5orf56Q8N8D9 126 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 OR56B4Q8NH76 319 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 CHPT1Q8WUD6 406 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 CNN2Q99439 309 aaKnown RBP7.16□□□□□ -1.26
SYNE2-209ENST00000553308 PLEKHA1Q9HB21 404 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 SEBOXQ9HB31 216 aaPredicted RBP7.16□□□□□ -1.26
SYNE2-209ENST00000553308 SLC25A19Q9HC21 320 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 ZFP57Q9NU63 452 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 TVP23BQ9NYZ1 205 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 TMEM14AQ9Y6G1 99 aa7.16□□□□□ -1.26
SYNE2-209ENST00000553308 TENM2Q9NT68 2774 aa7.15□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms