RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 ARL6IP1Q15041 203 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 ZNF718Q3SXZ3 478 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 ZNF626Q68DY1 528 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 VHLLQ6RSH7 139 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 OR5H2Q8NGV7 314 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 DMRTA2Q96SC8 542 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 PRRT1Q99946 306 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 J3QT63 122 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 FCGR3AP08637 254 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 KITLGP21583 273 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 KCNJ8Q15842 424 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 C2orf68Q2NKX9 166 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 VAX1Q5SQQ9 334 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 TCTE3Q8IZS6 198 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 MUC20Q8N307 709 aaPredicted RBP16.74■□□□□ 0.27
SSH1-209ENST00000551165 WDR89Q96FK6 387 aaPredicted RBP16.74■□□□□ 0.27
SSH1-209ENST00000551165 PKIBQ9C010 78 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 ZNF442Q9H7R0 627 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 CA10Q9NS85 328 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 ING3Q9NXR8 418 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 DUSP13Q9UII6 198 aa16.74■□□□□ 0.27
SSH1-209ENST00000551165 LRP5LA4QPB2 252 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 TBPP20226 339 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 MAB21L1Q13394 359 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 MBNL2Q5VZF2 373 aaKnown RBP16.73■□□□□ 0.27
SSH1-209ENST00000551165 ZNF826PQ6ZT77 177 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 OR13G1Q8NGZ3 307 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 MARCH1Q8TCQ1 289 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 MED19A0JLT2 244 aaPredicted RBP16.73■□□□□ 0.27
SSH1-209ENST00000551165 C16orf97H3BN30 126 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 CRYAAP02489 173 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 GCH1P30793 250 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 IKZF1Q13422 519 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 UNQ6126/PRO20091Q6UXV3 157 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 ADAD2Q8NCV1 583 aaKnown RBP16.73■□□□□ 0.27
SSH1-209ENST00000551165 OR5AP2Q8NGF4 316 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 MED30Q96HR3 178 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 PRORYQ9H606 182 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 EHFQ9NZC4 300 aa16.73■□□□□ 0.27
SSH1-209ENST00000551165 TPRP12270 2363 aaKnown RBP16.72■□□□□ 0.27
SSH1-209ENST00000551165 CREBL2O60519 120 aaPredicted RBP16.72■□□□□ 0.27
SSH1-209ENST00000551165 NPY4RP50391 375 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 MPPED2Q15777 294 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 C4orf46Q504U0 113 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 NHLRC3Q5JS37 347 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 PRAMEF6Q5VXH4 476 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 RGS7BPQ6MZT1 257 aaPredicted RBP16.72■□□□□ 0.27
SSH1-209ENST00000551165 C11orf53Q8IXP5 236 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 FAM58AQ8N1B3 248 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 RND1Q92730 232 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 MEMO1Q9Y316 297 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 BOLA1Q9Y3E2 137 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 OR4E1P0C645 316 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 OR3A3P47888 321 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 TSPAN5P62079 268 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 NKX6-1P78426 367 aaPredicted RBP16.72■□□□□ 0.27
SSH1-209ENST00000551165 CHRFAM7AQ494W8 412 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 OVCH2Q7RTZ1 564 aa16.72■□□□□ 0.27
SSH1-209ENST00000551165 ICE1Q9Y2F5 2266 aa16.71■□□□□ 0.27
SSH1-209ENST00000551165 FABP7O15540 132 aa16.71■□□□□ 0.27
SSH1-209ENST00000551165 THBDP07204 575 aa16.71■□□□□ 0.27
SSH1-209ENST00000551165 BAMBIQ13145 260 aa16.71■□□□□ 0.27
SSH1-209ENST00000551165 UXS1Q8NBZ7 420 aa16.71■□□□□ 0.27
SSH1-209ENST00000551165 TERB2Q8NHR7 220 aa16.71■□□□□ 0.27
SSH1-209ENST00000551165 VKORC1Q9BQB6 163 aa16.71■□□□□ 0.27
SSH1-209ENST00000551165 SYT3Q9BQG1 590 aa16.71■□□□□ 0.27
SSH1-209ENST00000551165 LIME1Q9H400 295 aa16.71■□□□□ 0.27
SSH1-209ENST00000551165 ANXA10Q9UJ72 324 aa16.71■□□□□ 0.27
SSH1-209ENST00000551165 HS3ST1O14792 307 aa16.71■□□□□ 0.26
SSH1-209ENST00000551165 PI3P19957 117 aa16.71■□□□□ 0.26
SSH1-209ENST00000551165 SNTB1Q13884 538 aaKnown RBP16.71■□□□□ 0.26
SSH1-209ENST00000551165 AADACL3Q5VUY0 350 aa16.71■□□□□ 0.26
SSH1-209ENST00000551165 NOXA1Q86UR1 476 aa16.71■□□□□ 0.26
SSH1-209ENST00000551165 WFDC8Q8IUA0 241 aa16.71■□□□□ 0.26
SSH1-209ENST00000551165 GPN1Q9HCN4 374 aaPredicted RBP16.71■□□□□ 0.26
SSH1-209ENST00000551165 ELOVL5Q9NYP7 299 aa16.71■□□□□ 0.26
SSH1-209ENST00000551165 RCC2Q9P258 522 aaKnown RBP16.71■□□□□ 0.26
SSH1-209ENST00000551165 COL6A6A6NMZ7 2263 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 SNRPGP15A8MWD9 76 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 CD40P25942 277 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 ERVK11-1P61568 191 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 MRPS15P82914 257 aaKnown RBP16.7■□□□□ 0.26
SSH1-209ENST00000551165 ACTBL2Q562R1 376 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 TMEM171Q8WVE6 324 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 RDH5Q92781 318 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 TMPRSS13Q9BYE2 586 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 PPA2Q9H2U2 334 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 UFSP2Q9NUQ7 469 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 MEIKINA0A087WXM9 373 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 TRAV24A0A0B4J272 114 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 FAM90A10PA6NDY2 464 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 FAM90A18PA6NE21 464 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 FAM90A16PA6NEW6 464 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 FAM90A20PA6NIJ5 464 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 FAM90A8PA6NJQ4 464 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 FAM90A7PA6NKC0 464 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 FAM90A22PA8MWA6 464 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 FAM90A12PA8MX19 464 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 FAM90A5PA8MXJ8 464 aa16.7■□□□□ 0.26
SSH1-209ENST00000551165 FAM90A23PA8MXZ1 464 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms