RNA–Protein interactions for RNA: ENST00000550376.5

PRDM4-205, Transcript of PR/SET domain 4, humanhuman

TSL 1 (best)

Gene PRDM4, Length 2,591 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-205ENST00000550376 ZMYND11Q15326 602 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 ACTBL2Q562R1 376 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 LHFPL1Q86WI0 220 aa17.92■□□□□ 0.46
PRDM4-205ENST00000550376 H0YL77 283 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 OR5H8P0DN80 308 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 PTGER4P35408 488 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 MPV17P39210 176 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 SUPT4H1P63272 117 aaKnown RBP17.91■□□□□ 0.46
PRDM4-205ENST00000550376 NSUN5P2Q63ZY6 315 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 SLC22A25Q6T423 547 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 OR5A2Q8NGI9 324 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 MITD1Q8WV92 249 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 IL2RAP01589 272 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 PGAM2P15259 253 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 PRKACAP17612 351 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 FUT3P21217 361 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 UCP2P55851 309 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 ATXN7L3Q14CW9 347 aaPredicted RBP17.91■□□□□ 0.46
PRDM4-205ENST00000550376 TEX261Q6UWH6 196 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 CLEC18BQ6UXF7 455 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 OR6K3Q8NGY3 331 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 IRF2BPLQ9H1B7 796 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 FAM215AQ9Y5M1 114 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 U3KQ87 197 aa17.91■□□□□ 0.46
PRDM4-205ENST00000550376 HEATR1Q9H583 2144 aaKnown RBP17.91■□□□□ 0.46
PRDM4-205ENST00000550376 PTPRQQ9UMZ3 2332 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 MCRIP1C9JLW8 97 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 TRAPPC2LH3BP13 241 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 C6orf183Q5T699 404 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 WDR86Q86TI4 376 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 TMEM17Q86X19 198 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 EXTL1Q92935 676 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 TOMM40LQ969M1 308 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 PLSCR4Q9NRQ2 329 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 TRAV14DV4A0A0A6YYC5 116 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 MPTX1A8MV57 137 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 HS3ST1O14792 307 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 ADAP1O75689 374 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 GLI4P10075 376 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 CALCRP30988 508 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 FXYD4P59646 89 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 PSG7Q13046 419 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 IKZF1Q13422 519 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 ARL6IP1Q15041 203 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 ZNF680Q8NEM1 530 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 OR5M8Q8NGP6 311 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 MRPS24Q96EL2 167 aaKnown RBP17.9■□□□□ 0.46
PRDM4-205ENST00000550376 PHB2Q99623 299 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 WDR13Q9H1Z4 485 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 SPTA1P02549 2419 aa17.9■□□□□ 0.46
PRDM4-205ENST00000550376 L7N2F9 121 aa17.89■□□□□ 0.46
PRDM4-205ENST00000550376 HOXC12P31275 282 aa17.89■□□□□ 0.46
PRDM4-205ENST00000550376 SEC61A1P61619 476 aaKnown RBP17.89■□□□□ 0.46
PRDM4-205ENST00000550376 TMEM128Q5BJH2 165 aa17.89■□□□□ 0.46
PRDM4-205ENST00000550376 DPPA2Q7Z7J5 298 aa17.89■□□□□ 0.46
PRDM4-205ENST00000550376 LILRB4Q8NHJ6 448 aa17.89■□□□□ 0.46
PRDM4-205ENST00000550376 PROCRQ9UNN8 238 aa17.89■□□□□ 0.46
PRDM4-205ENST00000550376 TP53TG5Q9Y2B4 290 aa17.89■□□□□ 0.46
PRDM4-205ENST00000550376 ZGRF1Q86YA3 2104 aa17.89■□□□□ 0.46
PRDM4-205ENST00000550376 PROB1E7EW31 1015 aa17.89■□□□□ 0.45
PRDM4-205ENST00000550376 ERVH48-1M5A8F1 160 aa17.89■□□□□ 0.45
PRDM4-205ENST00000550376 RGS11O94810 467 aa17.89■□□□□ 0.45
PRDM4-205ENST00000550376 CGAP01215 116 aa17.89■□□□□ 0.45
PRDM4-205ENST00000550376 ANKRD55Q3KP44 614 aa17.89■□□□□ 0.45
PRDM4-205ENST00000550376 CHMP1AQ9HD42 196 aaPredicted RBP17.89■□□□□ 0.45
PRDM4-205ENST00000550376 COX5AP20674 150 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 FPR2P25090 351 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 IGSF11Q5DX21 431 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 INO80CQ6PI98 192 aaPredicted RBP17.88■□□□□ 0.45
PRDM4-205ENST00000550376 SPACA3Q8IXA5 215 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 MKXQ8IYA7 352 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 NEK7Q8TDX7 302 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 C5orf51A6NDU8 294 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 DUS4LO95620 317 aaKnown RBP17.88■□□□□ 0.45
PRDM4-205ENST00000550376 CECR9P0C854 216 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 FABP6P51161 128 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 FGF12P61328 243 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 MRPL49Q13405 166 aaKnown RBP17.88■□□□□ 0.45
PRDM4-205ENST00000550376 OPCMLQ14982 345 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 OR2A2Q6IF42 318 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 PEG10Q86TG7 708 aaKnown RBP17.88■□□□□ 0.45
PRDM4-205ENST00000550376 OR8H3Q8N146 312 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 KLF14Q8TD94 323 aaPredicted RBP17.88■□□□□ 0.45
PRDM4-205ENST00000550376 RDH5Q92781 318 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 RDH8Q9NYR8 311 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 TINAGQ9UJW2 476 aa17.88■□□□□ 0.45
PRDM4-205ENST00000550376 CA11O75493 328 aa17.87■□□□□ 0.45
PRDM4-205ENST00000550376 GRPP07492 148 aa17.87■□□□□ 0.45
PRDM4-205ENST00000550376 GNG3P63215 75 aa17.87■□□□□ 0.45
PRDM4-205ENST00000550376 BEX5Q5H9J7 111 aa17.87■□□□□ 0.45
PRDM4-205ENST00000550376 MPC1Q9Y5U8 109 aa17.87■□□□□ 0.45
PRDM4-205ENST00000550376 CHD8Q9HCK8 2581 aa17.87■□□□□ 0.45
PRDM4-205ENST00000550376 M0R233 179 aa17.87■□□□□ 0.45
PRDM4-205ENST00000550376 SERPINF1P36955 418 aa17.87■□□□□ 0.45
PRDM4-205ENST00000550376 PPA1Q15181 289 aa17.87■□□□□ 0.45
PRDM4-205ENST00000550376 MPPED2Q15777 294 aa17.87■□□□□ 0.45
PRDM4-205ENST00000550376 ZNF660Q6AZW8 331 aaPredicted RBP17.87■□□□□ 0.45
PRDM4-205ENST00000550376 FBXW12Q6X9E4 464 aa17.87■□□□□ 0.45
PRDM4-205ENST00000550376 CISD2Q8N5K1 135 aaKnown RBP17.87■□□□□ 0.45
PRDM4-205ENST00000550376 PPP1R1CQ8WVI7 109 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms