RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 RPS9P46781 194 aaKnown RBP3.06□□□□□ -1.92
SCAF11-210ENST00000547654 PSMB2P49721 201 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 ERFP50548 548 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 DAPK1P53355 1430 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 IFITM3Q01628 133 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 TJP1Q07157 1748 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 RGNQ15493 299 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 TOMM34Q15785 309 aaPredicted RBP3.06□□□□□ -1.92
SCAF11-210ENST00000547654 LRRK1Q38SD2 2015 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 CEACAM21Q3KPI0 293 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 SLC36A2Q495M3 483 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 TCEAL5Q5H9L2 206 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 AVPI1Q5T686 147 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 HES5Q5TA89 166 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 STEAP4Q687X5 459 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 NIPAL1Q6NVV3 410 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 ARL9Q6T311 187 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 UGT2A3Q6UWM9 527 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 PGAM4Q8N0Y7 254 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 SLC34A3Q8N130 599 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 STPG2Q8N412 459 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 DEFB123Q8N688 67 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 TMEM251Q8N6I4 163 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 ACBD4Q8NC06 268 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 C19orf18Q8NEA5 215 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 OR5T1Q8NG75 326 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 OR2AE1Q8NHA4 323 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 NELFBQ8WX92 580 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 TCEAL3Q969E4 200 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 CPNE4Q96A23 557 aaPredicted RBP3.06□□□□□ -1.92
SCAF11-210ENST00000547654 TMEM159Q96B96 161 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 WDR34Q96EX3 536 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 MAGEB18Q96M61 343 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 OR2M4Q96R27 311 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 APOL4Q9BPW4 351 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 EMC6Q9BV81 110 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 TOLLIPQ9H0E2 274 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 LINC00597Q9H2U6 94 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 SPANXB1Q9NS25 103 aaPredicted RBP3.06□□□□□ -1.92
SCAF11-210ENST00000547654 TMEM100Q9NV29 134 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 PLEKHJ1Q9NW61 149 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 VNN3Q9NY84 501 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 TMEM9Q9P0T7 183 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 MYO15AQ9UKN7 3530 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 RAB22AQ9UL26 194 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 TFR2Q9UP52 801 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 DMXL1Q9Y485 3027 aa3.06□□□□□ -1.92
SCAF11-210ENST00000547654 POLR3HQ9Y535 204 aaPredicted RBP3.06□□□□□ -1.92
SCAF11-210ENST00000547654 ZNF831Q5JPB2 1677 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 CPSF1Q10570 1443 aaKnown RBP3.05□□□□□ -1.92
SCAF11-210ENST00000547654 SMG6Q86US8 1419 aaKnown RBP3.05□□□□□ -1.92
SCAF11-210ENST00000547654 POLR3AO14802 1390 aaPredicted RBP3.05□□□□□ -1.92
SCAF11-210ENST00000547654 ANKRD36BQ8N2N9 1353 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 ABCC11Q96J66 1382 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 USP24Q9UPU5 2620 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 SMIM26A0A096LP01 95 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 TMEM210A6NLX4 147 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 ZFP92A6NM28 416 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 SRRM5B3KS81 715 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 FTCDNL1E5RQL4 147 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 J3QT63 122 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 SLC16A4O15374 487 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 NPIPB7O75200 414 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 SUPT3HO75486 399 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 APOEP02649 317 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 P0C879 139 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 MAGP20916 626 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 S100A5P33763 92 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 TTPAP49638 278 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 CAV2P51636 162 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 STC1P52823 247 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 CEBPGP53567 150 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 RIPPLY3P57055 190 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 BNIP2Q12982 314 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 FADDQ13158 208 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 CAPRIN1Q14444 709 aaKnown RBP3.05□□□□□ -1.92
SCAF11-210ENST00000547654 RBMY1FQ15415 496 aaKnown RBP3.05□□□□□ -1.92
SCAF11-210ENST00000547654 C15orf32Q32M92 178 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 TTC32Q5I0X7 151 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 HHATQ5VTY9 493 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 CST9Q5W186 159 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 FBXW12Q6X9E4 464 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 USP50Q70EL3 339 aaPredicted RBP3.05□□□□□ -1.92
SCAF11-210ENST00000547654 C20orf203Q8NBC4 194 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 CCDC112Q8NEF3 446 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 NPBQ8NG41 125 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 OR2L5Q8NG80 312 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 OR5L1Q8NGL2 311 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 OR6N1Q8NGY5 312 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 OR6X1Q8NH79 312 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 OR10G6Q8NH81 332 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 TYMSOSQ8TAI1 123 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 MRAP2Q96G30 205 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 RNF185Q96GF1 192 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 C16orf74Q96GX8 76 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 FAM19A4Q96LR4 140 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 HBEGFQ99075 208 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 TMED9Q9BVK6 235 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 RHOFQ9HBH0 211 aa3.05□□□□□ -1.92
SCAF11-210ENST00000547654 C12orf4Q9NQ89 552 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms