RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 MOB3AQ96BX8 217 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 SPACA9Q96E40 222 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-225ENST00000545920 C14orf79Q96F83 325 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 ZNF799Q96GE5 643 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 FAM71F1Q96KD3 344 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-225ENST00000545920 C16orf92Q96LL3 132 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 CMSS1Q9BQ75 279 aaKnown RBP5.63□□□□□ -1.51
SNHG1-225ENST00000545920 SLC7A5P2Q9GIP4 190 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 MS4A5Q9H3V2 200 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 RIMS4Q9H426 269 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-225ENST00000545920 BANF2Q9H503 90 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 WDR54Q9H977 334 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 RPS10P5Q9NQ39 176 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 KIAA1456Q9P272 454 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 MYOTQ9UBF9 498 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 RNF150Q9ULK6 438 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 FAM96BQ9Y3D0 163 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 EML5Q05BV3 1969 aa5.63□□□□□ -1.51
SNHG1-225ENST00000545920 TP53BP1Q12888 1972 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-225ENST00000545920 ARHGEF17Q96PE2 2063 aaPredicted RBP5.63□□□□□ -1.51
SNHG1-225ENST00000545920 DOCK9Q9BZ29 2069 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 LOC102723996A0A087X1L8 192 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 TRBV11-1A0A0K0K1C0 115 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 PCP4L1A6NKN8 68 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 KIAA1324LA8MWY0 1029 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-225ENST00000545920 ZNF732B4DXR9 585 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 C22orf46C9J442 243 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 NPIPA2E9PIF3 369 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 K7N7A8 449 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 RER1O15258 196 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 XRCC2O43543 280 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 SGCEO43556 437 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 PDCD6O75340 191 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 EIF3GO75821 320 aaKnown RBP eCLIP5.62□□□□□ -1.51
SNHG1-225ENST00000545920 DFFBO76075 338 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 KNG1P01042 644 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 HSPB1P04792 205 aaKnown RBP5.62□□□□□ -1.51
SNHG1-225ENST00000545920 FABP1P07148 127 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 CD63P08962 238 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 ACAA1P09110 424 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-225ENST00000545920 ZNF806P0C7X5 589 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 FOLR1P15328 257 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 ZNF44P15621 663 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 S100GP29377 79 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 TAGLN2P37802 199 aaKnown RBP5.62□□□□□ -1.51
SNHG1-225ENST00000545920 PTGDSP41222 190 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 RBP2P50120 134 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 FUT6P51993 359 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 ARHGDIBP52566 201 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 AKR1C2P52895 323 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 DSCR4P56555 118 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-225ENST00000545920 PIGPP57054 158 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 HERV-K104P61576 105 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 TFF2Q03403 129 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 HGFACQ04756 655 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 AKR1C1Q04828 323 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 PNRC1Q12796 327 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-225ENST00000545920 PMS2P11Q13670 270 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 ENDOGQ14249 297 aaKnown RBP5.62□□□□□ -1.51
SNHG1-225ENST00000545920 EXT1Q16394 746 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 KRTAP27-1Q3LI81 207 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 MIDNQ504T8 468 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 HIKESHIQ53FT3 197 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 AWAT1Q58HT5 328 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 SOHLH1Q5JUK2 328 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 RIPPLY2Q5TAB7 128 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 FBXW12Q6X9E4 464 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 LANCL3Q6ZV70 420 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 GALNTL5Q7Z4T8 443 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 SLC35E3Q7Z769 313 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 LINC00596Q86U02 117 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 MAML2Q8IZL2 1156 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-225ENST00000545920 TMEM123Q8N131 208 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 GPR137CQ8N3F9 429 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 SUMF2Q8NBJ7 301 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 OR4D5Q8NGN0 318 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 OR2I1PQ8NGU4 316 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 OR14L1PQ8NHC6 308 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 DNASE2BQ8WZ79 361 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 AKR1E2Q96JD6 320 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 TMEM56Q96MV1 263 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 PIGQQ9BRB3 760 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 EMC6Q9BV81 110 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 SCRT1Q9BWW7 348 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 OPA3Q9H6K4 179 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 PLEKHF2Q9H8W4 249 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 CERS4Q9HA82 394 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 ZNF701Q9NV72 531 aaPredicted RBP5.62□□□□□ -1.51
SNHG1-225ENST00000545920 TMEM242Q9NWH2 141 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 SLC7A11Q9UPY5 501 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 PIGLQ9Y2B2 252 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 MTCH2Q9Y6C9 303 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 TMEM56-RWDD3S4R434 201 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 KIF26BQ2KJY2 2108 aa5.62□□□□□ -1.51
SNHG1-225ENST00000545920 OR6C6A6NF89 314 aa5.61□□□□□ -1.51
SNHG1-225ENST00000545920 ZNF850A8MQ14 1090 aa5.61□□□□□ -1.51
SNHG1-225ENST00000545920 NPIPA3F8WFD2 350 aa5.61□□□□□ -1.51
SNHG1-225ENST00000545920 H3BML4 177 aa5.61□□□□□ -1.51
SNHG1-225ENST00000545920 M0R036 132 aa5.61□□□□□ -1.51
SNHG1-225ENST00000545920 SDCBPO00560 298 aaPredicted RBP5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms