RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 MIDNQ504T8 468 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 MOB1BQ7L9L4 216 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 OR2M3Q8NG83 312 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 OR2T6Q8NHC8 308 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 ZNF721Q8TF20 911 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 SLC35D1Q9NTN3 355 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 GEMIN2O14893 280 aaKnown RBP11.3□□□□□ -0.6
CHD4-211ENST00000544484 CYTIPO60759 359 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 OR5I1Q13606 314 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 ZPLD1Q8TCW7 415 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 NDFIP1Q9BT67 221 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 NIT2Q9NQR4 276 aa11.3□□□□□ -0.6
CHD4-211ENST00000544484 METTL15P1P0C7V9 234 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 DCAF10Q5QP82 559 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 UQCC1Q9NVA1 299 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 TRAV8-7A0A075B6U6 113 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 HRASP01112 189 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 BGLAPP02818 100 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 CD300CQ08708 224 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 ZNF528Q3MIS6 628 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 NAA60Q9H7X0 242 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 CLEC9AQ6UXN8 241 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 ZNF574Q6ZN55 896 aaPredicted RBP11.29□□□□□ -0.6
CHD4-211ENST00000544484 BHLHA15Q7RTS1 189 aaPredicted RBP11.29□□□□□ -0.6
CHD4-211ENST00000544484 TRAV39A0A0B4J263 110 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 ANKRD20A5PA0PJZ0 165 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 OR5B21A6NL26 309 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 GZMMP51124 257 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 SKA3Q8IX90 412 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 ZNF385AQ96PM9 386 aaKnown RBP11.29□□□□□ -0.6
CHD4-211ENST00000544484 RAB18Q9NP72 206 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 GPR27Q9NS67 375 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.29□□□□□ -0.6
CHD4-211ENST00000544484 ZDBF2Q9HCK1 2354 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 FAM157AC9JC47 383 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 G3V3Q6 166 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 TMPRSS2O15393 492 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 ST8SIA5O15466 376 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 ZNHIT1O43257 154 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 GREM1O60565 184 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 LSM6P62312 80 aaKnown RBP11.29□□□□□ -0.6
CHD4-211ENST00000544484 MGAT2Q10469 447 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 ACSM6Q6P461 480 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 SF3B5Q9BWJ5 86 aaKnown RBP11.29□□□□□ -0.6
CHD4-211ENST00000544484 CXXC4Q9H2H0 198 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 IL36GQ9NZH8 169 aa11.29□□□□□ -0.6
CHD4-211ENST00000544484 CKAP5Q14008 2032 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 ZNF320A2RRD8 509 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 OR4C45A6NMZ5 311 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 C21orf140B9A014 251 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 MPGP29372 298 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 ACAA2P42765 397 aaKnown RBP11.28□□□□□ -0.6
CHD4-211ENST00000544484 HLXQ14774 488 aaPredicted RBP11.28□□□□□ -0.6
CHD4-211ENST00000544484 C11orf91Q3C1V1 193 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 FFAR4Q5NUL3 377 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 NUFIP2Q7Z417 695 aaKnown RBP11.28□□□□□ -0.6
CHD4-211ENST00000544484 ZNF501Q96CX3 271 aaPredicted RBP11.28□□□□□ -0.6
CHD4-211ENST00000544484 DBX1A6NMT0 343 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 NPIPB8E9PQR5 432 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 ADAM10O14672 748 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 IGHA1P01876 353 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 LIFP15018 202 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 SLC38A11Q08AI6 406 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 MPC1Q9Y5U8 109 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 CASP8AP2Q9UKL3 1982 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 MPC2O95563 127 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 Q56UQ5 140 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 OR2M7Q8NG81 312 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 PRR7Q8TB68 274 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 TMEM56Q96MV1 263 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 UCK1Q9HA47 277 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 MARF1Q9Y4F3 1742 aaKnown RBP11.28□□□□□ -0.6
CHD4-211ENST00000544484 FOXO1Q12778 655 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 GPR35Q9HC97 309 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 PGA3P0DJD8 388 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 BCL3P20749 454 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 PMS2CLQ68D20 193 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 SHANK3Q9BYB0 1731 aa11.28□□□□□ -0.6
CHD4-211ENST00000544484 ZNF785A8K8V0 405 aa11.27□□□□□ -0.6
CHD4-211ENST00000544484 TDRD6O60522 2096 aaKnown RBP11.27□□□□□ -0.6
CHD4-211ENST00000544484 ASB13Q8WXK3 278 aa11.27□□□□□ -0.6
CHD4-211ENST00000544484 SLC52A3Q9NQ40 469 aa11.27□□□□□ -0.6
CHD4-211ENST00000544484 RNASEK-C17orf49H0YIS7 233 aa11.27□□□□□ -0.6
CHD4-211ENST00000544484 CST4P01036 141 aa11.27□□□□□ -0.6
CHD4-211ENST00000544484 GABRA1P14867 456 aa11.27□□□□□ -0.6
CHD4-211ENST00000544484 OR2H1Q9GZK4 316 aa11.27□□□□□ -0.6
CHD4-211ENST00000544484 hADV38S2A0JD32 116 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 DUS4LO95620 317 aaKnown RBP11.27□□□□□ -0.61
CHD4-211ENST00000544484 IL11P20809 199 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 ASB5Q8WWX0 329 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 MARVELD1Q9BSK0 173 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 POLR2GP62487 172 aaKnown RBP eCLIP11.27□□□□□ -0.61
CHD4-211ENST00000544484 H3F3AP84243 136 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 INPP5JQ15735 1006 aaPredicted RBP11.27□□□□□ -0.61
CHD4-211ENST00000544484 GUK1Q16774 197 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 MOGAT3Q86VF5 341 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 OIT3Q8WWZ8 545 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 ACTL6AO96019 429 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 SFTA3P0C7M3 94 aa11.27□□□□□ -0.61
CHD4-211ENST00000544484 MDH2P40926 338 aaKnown RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms