RNA–Protein interactions for RNA: ENST00000544455.5

BRCA2-206, Transcript of BRCA2, DNA repair associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRCA2, Length 10,984 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-206ENST00000544455 CCL28Q9NRJ3 127 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 PLA2G2EQ9NZK7 142 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 PDE4DIPQ5VU43 2346 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 FAM74A7A6NL05 159 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 DBX1A6NMT0 343 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 NME2P1O60361 137 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 C1QL1O75973 258 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 HOXD4P09016 255 aaPredicted RBP3.23□□□□□ -1.89
BRCA2-206ENST00000544455 RBM11P57052 281 aaKnown RBP3.23□□□□□ -1.89
BRCA2-206ENST00000544455 SSBP1Q04837 148 aaKnown RBP3.23□□□□□ -1.89
BRCA2-206ENST00000544455 ZNF169Q14929 603 aaPredicted RBP3.23□□□□□ -1.89
BRCA2-206ENST00000544455 FAM74A3Q4VXF1 159 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 ETV3LQ6ZN32 361 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 PEG10Q86TG7 708 aaKnown RBP3.23□□□□□ -1.89
BRCA2-206ENST00000544455 ARRDC1Q8N5I2 433 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 HSD17B11Q8NBQ5 300 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 OR1A1Q9P1Q5 309 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 A0A0D9SG52 128 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 ZNF816-ZNF321PA0A0X1KG74 233 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 OR6C65A6NJZ3 312 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 B3GALNT1O75752 331 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 IL18BPO95998 194 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 FBXW12Q6X9E4 464 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 ACOT7LQ6ZUV0 252 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 EIF4E3Q8N5X7 224 aaKnown RBP3.23□□□□□ -1.89
BRCA2-206ENST00000544455 FDCSPQ8NFU4 85 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 GTF3AQ92664 365 aaKnown RBP3.23□□□□□ -1.89
BRCA2-206ENST00000544455 C20orf24Q9BUV8 137 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 SLC5A7Q9GZV3 580 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 RASL12Q9NYN1 266 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 OR14J1Q9UGF5 321 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 UBBP0CG47 229 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 NFYBP25208 207 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 APLNRP35414 380 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 TAS2R46P59540 309 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 AIMP2Q13155 320 aaKnown RBP3.23□□□□□ -1.89
BRCA2-206ENST00000544455 LTC4SQ16873 150 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 DEFB109BQ30KR1 87 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 MDP1Q86V88 176 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 LDLRAD3Q86YD5 345 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 CBLN2Q8IUK8 224 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 OR51H1Q8NH63 302 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 SH3BGRL2Q9UJC5 107 aa3.23□□□□□ -1.89
BRCA2-206ENST00000544455 RALYQ9UKM9 306 aaKnown RBP3.23□□□□□ -1.89
BRCA2-206ENST00000544455 FAM24AA6NFZ4 105 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 MPV17P39210 176 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 FUT6P51993 359 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 TMEM33P57088 247 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 ZDHHC23Q8IYP9 409 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 OR52H1Q8NGJ2 320 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 OR2J1Q9GZK6 312 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 TMEM9BQ9NQ34 198 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 SERPINE3A8MV23 424 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 DEFB108AA8MXU0 73 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 PROB1E7EW31 1015 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 KLRC4-KLRK1H3BQV0 150 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 CDIPTO14735 213 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 ACTL6AO96019 429 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 FTH1P19P0C7X4 201 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 UBA52P62987 128 aaKnown RBP3.22□□□□□ -1.89
BRCA2-206ENST00000544455 TLE1Q04724 770 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 CLINT1Q14677 625 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 MPPED2Q15777 294 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 TM2D1Q9BX74 207 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 WFDC1Q9HC57 220 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 SLC2A9Q9NRM0 540 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 B4GALT7Q9UBV7 327 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 ZDHHC8Q9ULC8 765 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 NUP210LQ5VU65 1888 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 IGHV3-43A0A0B4J1X8 118 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 IGKV1-6A0A0C4DH72 117 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 A0A0G2JRQ6 117 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 LOC105371267A0A1B0GV96 52 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 OR2F2O95006 317 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 MBPP02686 304 aaPredicted RBP3.22□□□□□ -1.89
BRCA2-206ENST00000544455 IGHV3-43DP0DP04 118 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 ZNF44P15621 663 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 NAT1P18440 290 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 ZP3P21754 424 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 CEBPGP53567 150 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 FOXF2Q12947 444 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 OR2F1Q13607 317 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 TMEM268Q5VZI3 342 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 PRSS54Q6PEW0 395 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 BAP18Q8IXM2 172 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 GAPTQ8N292 157 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 DDA1Q9BW61 102 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 OPN3Q9H1Y3 402 aaPredicted RBP3.22□□□□□ -1.89
BRCA2-206ENST00000544455 TAF9BQ9HBM6 251 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 KIF25Q9UIL4 384 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 ABCD4O14678 606 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 CNOT4O95628 575 aaKnown RBP3.22□□□□□ -1.89
BRCA2-206ENST00000544455 RPL12P30050 165 aaKnown RBP3.22□□□□□ -1.89
BRCA2-206ENST00000544455 TAS2R31P59538 309 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 PNLIPRP3Q17RR3 467 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 VAX1Q5SQQ9 334 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 WDR86Q86TI4 376 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 SUMF2Q8NBJ7 301 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 SLC30A7Q8NEW0 376 aa3.22□□□□□ -1.89
BRCA2-206ENST00000544455 IER2Q9BTL4 223 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms